RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CACNG3O60359 315 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ERLIN1O75477 346 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 MED6O75586 246 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 KRT34O76011 436 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 MOSP00540 346 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 RETP07949 1114 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 FGF4P08620 206 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ZNF286BP0CG31 522 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 TROVE2P10155 538 aaKnown RBP eCLIP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ZNF3P17036 446 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 GALP22466 123 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 PTPN6P29350 595 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 TAGLN2P37802 199 aaKnown RBP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 MDH1P40925 334 aaKnown RBP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 CARD18P57730 90 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 CSNK1G2P78368 415 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 SARNPP82979 210 aaKnown RBP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 GFPT1Q06210 699 aaPredicted RBP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 SPAG1Q07617 926 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ZSCAN26Q16670 478 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 CASC10Q5T4H9 136 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 NEK5Q6P3R8 708 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 C6orf89Q6UWU4 347 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 FAM159AQ6UWV7 190 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 RFLNAQ6ZTI6 216 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ARMCX2Q7L311 632 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 VRK2Q86Y07 508 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 KRTAP13-1Q8IUC0 172 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 NKAIN4Q8IVV8 208 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 LEMD2Q8NC56 503 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 NEK11Q8NG66 645 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 CCDC110Q8TBZ0 833 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ACMSDQ8TDX5 336 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 SLC13A3Q8WWT9 602 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ANKRD7Q92527 254 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 NCLNQ969V3 563 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 MRPL38Q96DV4 380 aaKnown RBP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 C19orf60Q96EN9 201 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ARL5BQ96KC2 179 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 FOPNLQ96NB1 174 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 TTC25Q96NG3 672 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 CATSPER2Q96P56 530 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 CYP2S1Q96SQ9 504 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 RUFY1Q96T51 708 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 KCNK16Q96T55 309 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 RASL11BQ9BPW5 248 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 CCDC77Q9BR77 488 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 RIOK1Q9BRS2 568 aaKnown RBP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 EDEM2Q9BV94 578 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 DDX47Q9H0S4 455 aaKnown RBP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ING2Q9H160 280 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 POLR3FQ9H1D9 316 aaPredicted RBP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 HAUS4Q9H6D7 363 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 C8orf33Q9H7E9 229 aaPredicted RBP1.66□□□□□ -2.14
TRAV40-201ENST00000390467 GORASP2Q9H8Y8 452 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 MED4Q9NPJ6 270 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 SOHLH2Q9NX45 425 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 CYP39A1Q9NYL5 469 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 ANGPTL2Q9UKU9 493 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 MYO3BQ8WXR4 1341 aa1.66□□□□□ -2.14
TRAV40-201ENST00000390467 DHX29Q7Z478 1369 aaKnown RBP1.65□□□□□ -2.15
TRAV40-201ENST00000390467 TRAV6A0A075B6T7 132 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 A0A0G2JRQ6 117 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 SLC9B1P1A6NJY1 282 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 C11orf94C9JXX5 98 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 E9PBE3 544 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 H3BTX0 84 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 OR10H3O60404 316 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 HSF2BPO75031 334 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 FLOT1O75955 427 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 DIRAS3O95661 229 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 SLC25A27O95847 323 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 UBTFL6P0CB48 400 aaPredicted RBP1.65□□□□□ -2.15
TRAV40-201ENST00000390467 ADRB3P13945 408 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 NCF1P14598 390 aaPredicted RBP1.65□□□□□ -2.15
TRAV40-201ENST00000390467 HPGDP15428 266 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 IGFBP3P17936 291 aaPredicted RBP1.65□□□□□ -2.15
TRAV40-201ENST00000390467 GLRA2P23416 452 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 CHMLP26374 656 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 PRDX6P30041 224 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 PRDX2P32119 198 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 CA8P35219 290 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 PLTPP55058 493 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 EIF3EP60228 445 aaKnown RBP1.65□□□□□ -2.15
TRAV40-201ENST00000390467 UBE2HP62256 183 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 NUCB2P80303 420 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 FUT7Q11130 342 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 PLD1Q13393 1074 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 DDX39BQ13838 428 aaKnown RBP1.65□□□□□ -2.15
TRAV40-201ENST00000390467 RABGAP1LQ5R372 815 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 RIPPLY2Q5TAB7 128 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 ETFRF1Q6IPR1 90 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 FAM71E1Q6IPT2 247 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 TAF8Q7Z7C8 310 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 PSTKQ8IV42 348 aaKnown RBP1.65□□□□□ -2.15
TRAV40-201ENST00000390467 CD302Q8IX05 232 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 FAM9CQ8IZT9 166 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 LINC01561Q8N1V8 128 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 BBS5Q8N3I7 341 aa1.65□□□□□ -2.15
TRAV40-201ENST00000390467 ZCCHC7Q8N3Z6 543 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms