RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 MAKP20794 623 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 RPS15AP62244 130 aaKnown RBP12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC7A9P82251 487 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 RBMS2Q15434 407 aaKnown RBP12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 PRAMEF9Q5VWM5 478 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 LAS2Q8IYD9 372 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 NMNAT3Q96T66 252 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 DPYSL5Q9BPU6 564 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 A4GNTQ9UNA3 340 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF281Q9Y2X9 895 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLC6A5Q9Y345 797 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 TMEM72A0PK05 275 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF736B4DX44 427 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 ERVH48-1M5A8F1 160 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 EGFP01133 1207 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 RORAP35398 523 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 HMGA2P52926 109 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 CHAF1BQ13112 559 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 TMPRSS9Q7Z410 1059 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR5K2Q8NHB8 316 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 DCUN1D4Q92564 292 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF285Q96NJ3 590 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 SAMD11Q96NU1 681 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 SGK494L7N484 410 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 HCKP08631 526 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 RAB40ALP0C0E4 278 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 AKR1C2P52895 323 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 CXADRP78310 365 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 AKR1C1Q04828 323 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 STK11Q15831 433 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 YOD1Q5VVQ6 348 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 SLAIN1Q8ND83 568 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 RAB40AQ8WXH6 277 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR2M4Q96R27 311 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF700Q9H0M5 742 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 ISYNA1Q9NPH2 558 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 GPN3Q9UHW5 284 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 IFNA21P01568 189 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 PRMT2P55345 433 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 CDK3Q00526 305 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 TSC22D1Q15714 1073 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 RELL2Q8NC24 303 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF417Q8TAU3 575 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 ARL11Q969Q4 196 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 INSM2Q96T92 566 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 HRH3Q9Y5N1 445 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 GAPDHSO14556 408 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 AK1P00568 194 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF628Q5EBL2 1059 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 TMUB2Q71RG4 321 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 NEK7Q8TDX7 302 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 RAB7BQ96AH8 199 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 ORAI3Q9BRQ5 295 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 B3GAT2Q9NPZ5 323 aa12.2□□□□□ -0.46
TRAPPC9-201ENST00000389328 LEUTXA8MZ59 168 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 WRBO00258 174 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 FADS1O60427 444 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 FGF9P31371 208 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 IRF3Q14653 427 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 DEFB110Q30KQ9 67 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ALG10Q5BKT4 473 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 NLRC3Q7RTR2 1065 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 LIX1LQ8IVB5 337 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZNF511Q8NB15 262 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR6M1Q8NGM8 313 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 THRSPQ92748 146 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 PMM1Q92871 262 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZBTB8AQ96BR9 441 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 HCAR1Q9BXC0 346 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 CYSLTR2Q9NS75 346 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ADAM29Q9UKF5 820 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 TMEM150CB9EJG8 249 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 NPC1O15118 1278 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 GMDSO60547 372 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 CD160O95971 181 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 HLA-AP01891 365 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 APEHP13798 732 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 CD79BP40259 229 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 CSNK1G2P78368 415 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 SSX6Q7RTT6 188 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 CSNK1A1LQ8N752 337 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 NAXEQ8NCW5 288 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 DNAAF1Q8NEP3 725 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR2AJ1Q8NGZ0 328 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 SCARB1Q8WTV0 552 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 FBLIM1Q8WUP2 373 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 CNTNAP3BQ96NU0 1288 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ZMAT3Q9HA38 289 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 SURF4O15260 269 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 GPRIN2O60269 458 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 LDOC1O95751 146 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ITGA5P08648 1049 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 OR2T7P0C7T2 308 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 UBBP0CG47 229 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 UBCP0CG48 685 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 SRMP19623 302 aa12.19□□□□□ -0.46
TRAPPC9-201ENST00000389328 ITGB7P26010 798 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms