RNA–Protein interactions for RNA: ENST00000389103.4

UBE3C-202, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 5 BASIC

Gene UBE3C, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-202ENST00000389103 A0A096LPI6 279 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 SMPD2O60906 423 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 IGHV3-9P01782 118 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 IGHV1-2P23083 117 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 H3F3AP84243 136 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 PAGE3Q5JUK9 113 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 BHLHA15Q7RTS1 189 aaPredicted RBP12.47□□□□□ -0.41
UBE3C-202ENST00000389103 HDXQ7Z353 690 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 ZNF440Q8IYI8 595 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 C10orf111Q8N326 155 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 PIGXQ8TBF5 258 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 HSD17B8Q92506 261 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 DDIT4LQ96D03 193 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 GSX1Q9H4S2 264 aaPredicted RBP12.47□□□□□ -0.41
UBE3C-202ENST00000389103 A4GALTQ9NPC4 353 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 INTS9Q9NV88 658 aaKnown RBP12.47□□□□□ -0.41
UBE3C-202ENST00000389103 THUMPD1Q9NXG2 353 aaKnown RBP12.47□□□□□ -0.41
UBE3C-202ENST00000389103 EMC3Q9P0I2 261 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 TRAPPC4Q9Y296 219 aa12.47□□□□□ -0.41
UBE3C-202ENST00000389103 NOSIPQ9Y314 301 aaKnown RBP12.47□□□□□ -0.41
UBE3C-202ENST00000389103 FREM1Q5H8C1 2179 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 A0A0G2JPF8 293 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 HMGB1P1B2RPK0 211 aaPredicted RBP12.46□□□□□ -0.41
UBE3C-202ENST00000389103 HNRNPCL2B2RXH8 293 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 HNRNPCL3B7ZW38 293 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 DNPH1O43598 174 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 HNRNPCL1O60812 293 aaKnown RBP12.46□□□□□ -0.41
UBE3C-202ENST00000389103 THBS1P07996 1170 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 HNRNPCL4P0DMR1 293 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 BMP2P12643 396 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 UQCRBP14927 111 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 H2AFXP16104 143 aaPredicted RBP12.46□□□□□ -0.41
UBE3C-202ENST00000389103 BNIP2Q12982 314 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 CAPRIN1Q14444 709 aaKnown RBP12.46□□□□□ -0.41
UBE3C-202ENST00000389103 Q5PR19 223 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 LRIF1Q5T3J3 769 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 RNF220Q5VTB9 566 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 SERPINA11Q86U17 422 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 CADM2Q8N3J6 435 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 GOLGA6L1Q8N7Z2 621 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 LILRB1Q8NHL6 650 aaPredicted RBP12.46□□□□□ -0.41
UBE3C-202ENST00000389103 IGFBPL1Q8WX77 278 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 SPDL1Q96EA4 605 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 THOC1Q96FV9 657 aaKnown RBP12.46□□□□□ -0.41
UBE3C-202ENST00000389103 PERPQ96FX8 193 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 RSPO3Q9BXY4 272 aaPredicted RBP12.46□□□□□ -0.41
UBE3C-202ENST00000389103 POTEKPQ9BYX7 375 aa12.46□□□□□ -0.41
UBE3C-202ENST00000389103 TMEM247A6NEH6 219 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 COX5AP20674 150 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 ADSLP30566 484 aaPredicted RBP12.45□□□□□ -0.42
UBE3C-202ENST00000389103 SLC16A1P53985 500 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 SLC35A1P78382 337 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 FADDQ13158 208 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 LARS2Q15031 903 aaKnown RBP12.45□□□□□ -0.42
UBE3C-202ENST00000389103 STK11Q15831 433 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 AGKQ53H12 422 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 NCMAPQ5T1S8 102 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 P3H2Q8IVL5 708 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 LRRC75A-AS1Q8N1F1 130 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 UBE2J2Q8N2K1 259 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 CKAP2Q8WWK9 683 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 APH1AQ96BI3 265 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 SPATA9Q9BWV2 254 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 VIPAS39Q9H9C1 493 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 BCL2L10Q9HD36 194 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 VAPAQ9P0L0 249 aa12.45□□□□□ -0.42
UBE3C-202ENST00000389103 HS3ST1O14792 307 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 FRS3O43559 492 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 PGM3O95394 542 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 CNOT4O95628 575 aaKnown RBP12.44□□□□□ -0.42
UBE3C-202ENST00000389103 CXCR1P25024 350 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 MAP2K6P52564 334 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 HOXC5Q00444 222 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 CEACAM7Q14002 265 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 ZNF311Q5JNZ3 666 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 SHEQ5VZ18 495 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 FBXW9Q5XUX1 488 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 WBP2NLQ6ICG8 309 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 ZNF433Q8N7K0 673 aaPredicted RBP12.44□□□□□ -0.42
UBE3C-202ENST00000389103 BBS10Q8TAM1 723 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 AKAP1Q92667 903 aaKnown RBP eCLIP12.44□□□□□ -0.42
UBE3C-202ENST00000389103 NEUROG1Q92886 237 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 RAD21L1Q9H4I0 556 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 IKZF5Q9H5V7 419 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 ZNF232Q9UNY5 417 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 FLVCR1Q9Y5Y0 555 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 NF1P21359 2839 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 PRR14LQ5THK1 2151 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 TRBV5-3A0A0A0MS03 114 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 DPRXA6NFQ7 191 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 LIPT2A6NK58 231 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 GPR171O14626 319 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 CLOCKO15516 846 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 EIF1BO60739 113 aaKnown RBP12.44□□□□□ -0.42
UBE3C-202ENST00000389103 MRPL33O75394 65 aaKnown RBP12.44□□□□□ -0.42
UBE3C-202ENST00000389103 RAD51DO75771 328 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 SASH3O75995 380 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 FOSL1P15407 271 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 GGT1P19440 569 aa12.44□□□□□ -0.42
UBE3C-202ENST00000389103 NCF2P19878 526 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms