RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 A0A096LPI6 279 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 ZNF716A6NP11 495 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 CLIC1O00299 241 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 ARHGEF9O43307 516 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 ZNF208O43345 1280 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 DNPH1O43598 174 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 IGHV3-9P01782 118 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 NUDT7P0C024 238 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 MRPL19P49406 292 aaKnown RBP16.12■□□□□ 0.17
CD9-204ENST00000382519 COPZ1P61923 177 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 SLC35A1P78382 337 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 PDK3Q15120 406 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 RGNQ15493 299 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 RNF220Q5VTB9 566 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 SHEQ5VZ18 495 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 HDXQ7Z353 690 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 KRTAP1-3Q8IUG1 177 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 CCDC103Q8IW40 242 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 HSD17B8Q92506 261 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 APH1AQ96BI3 265 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 PERPQ96FX8 193 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 ARGLU1Q9NWB6 273 aaPredicted RBP16.12■□□□□ 0.17
CD9-204ENST00000382519 CCDC167Q9P0B6 97 aa16.12■□□□□ 0.17
CD9-204ENST00000382519 SETD2Q9BYW2 2564 aaPredicted RBP16.11■□□□□ 0.17
CD9-204ENST00000382519 A0A0G2JPF8 293 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 ZC3H12DA2A288 527 aaKnown RBP16.11■□□□□ 0.17
CD9-204ENST00000382519 HMGB1P1B2RPK0 211 aaPredicted RBP16.11■□□□□ 0.17
CD9-204ENST00000382519 HNRNPCL2B2RXH8 293 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 HNRNPCL3B7ZW38 293 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 C5orf58C9J3I9 102 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 GPR171O14626 319 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 CLOCKO15516 846 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 HNRNPCL1O60812 293 aaKnown RBP16.11■□□□□ 0.17
CD9-204ENST00000382519 RAMP1O60894 148 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 THBS1P07996 1170 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 HNRNPCL4P0DMR1 293 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 NCF2P19878 526 aaPredicted RBP16.11■□□□□ 0.17
CD9-204ENST00000382519 CXCR1P25024 350 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 FADDQ13158 208 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 LRRC75A-AS1Q8N1F1 130 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 MAL2Q969L2 176 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 SPDL1Q96EA4 605 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 USB1Q9BQ65 265 aaKnown RBP16.11■□□□□ 0.17
CD9-204ENST00000382519 TMEM204Q9BSN7 226 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 NAA11Q9BSU3 229 aaPredicted RBP16.11■□□□□ 0.17
CD9-204ENST00000382519 ARMC7Q9H6L4 198 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 ESRP2Q9H6T0 727 aaKnown RBP16.11■□□□□ 0.17
CD9-204ENST00000382519 A4GALTQ9NPC4 353 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 DLL4Q9NR61 685 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 ZNF232Q9UNY5 417 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 TRAPPC4Q9Y296 219 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 RNF115Q9Y4L5 304 aa16.11■□□□□ 0.17
CD9-204ENST00000382519 HS3ST1O14792 307 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 EIF1BO60739 113 aaKnown RBP16.1■□□□□ 0.17
CD9-204ENST00000382519 CD3EP07766 207 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 IMPDH2P12268 514 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 COX5AP20674 150 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 IGHV1-2P23083 117 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 IDUAP35475 653 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 ACAA2P42765 397 aaKnown RBP16.1■□□□□ 0.17
CD9-204ENST00000382519 MAP2K6P52564 334 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 ZNF311Q5JNZ3 666 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 WBP2NLQ6ICG8 309 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 BLOC1S3Q6QNY0 202 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 CASP12Q6UXS9 341 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 FUNDC1Q8IVP5 155 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 CLIP4Q8N3C7 705 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 BBS10Q8TAM1 723 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 AKAP1Q92667 903 aaKnown RBP eCLIP16.1■□□□□ 0.17
CD9-204ENST00000382519 SPATA9Q9BWV2 254 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 SLC25A37Q9NYZ2 338 aa16.1■□□□□ 0.17
CD9-204ENST00000382519 MRPL33O75394 65 aaKnown RBP16.09■□□□□ 0.17
CD9-204ENST00000382519 RAD51DO75771 328 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 CNOT4O95628 575 aaKnown RBP16.09■□□□□ 0.17
CD9-204ENST00000382519 PRG2P13727 222 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 FOSL1P15407 271 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 HOXB9P17482 250 aaPredicted RBP16.09■□□□□ 0.17
CD9-204ENST00000382519 GGT1P19440 569 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 ADSLP30566 484 aaPredicted RBP16.09■□□□□ 0.17
CD9-204ENST00000382519 SLC16A1P53985 500 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 SQLEQ14534 574 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 PPA1Q15181 289 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 ZSWIM7Q19AV6 140 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 AGKQ53H12 422 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 NCMAPQ5T1S8 102 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 LRIF1Q5T3J3 769 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 GCNT6Q5T4J0 391 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 FBXW9Q5XUX1 488 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 ATG4DQ86TL0 474 aaPredicted RBP16.09■□□□□ 0.17
CD9-204ENST00000382519 SERPINA11Q86U17 422 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 TMEM171Q8WVE6 324 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 MUCL1Q96DR8 90 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 THOC1Q96FV9 657 aaKnown RBP16.09■□□□□ 0.17
CD9-204ENST00000382519 ADAM19Q9H013 955 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 IFT52Q9Y366 437 aa16.09■□□□□ 0.17
CD9-204ENST00000382519 CIB4A0PJX0 185 aa16.08■□□□□ 0.16
CD9-204ENST00000382519 CCT8L1PA6NM43 557 aa16.08■□□□□ 0.16
CD9-204ENST00000382519 FRS3O43559 492 aa16.08■□□□□ 0.16
CD9-204ENST00000382519 GPIP06744 558 aa16.08■□□□□ 0.16
CD9-204ENST00000382519 BMP2P12643 396 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms