RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 AQP5P55064 265 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 SLC35A1P78382 337 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 PDK3Q15120 406 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 STK11Q15831 433 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 RPS26P11Q5JNZ5 115 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 CADM2Q8N3J6 435 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 WFDC11Q8NEX6 87 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 GTF2H4Q92759 462 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 EBF4Q9BQW3 602 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 RLIMQ9NVW2 624 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 CCDC167Q9P0B6 97 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 TRAPPC4Q9Y296 219 aa21.86■■□□□ 1.09
TNFRSF4-201ENST00000379236 CDHR4A6H8M9 788 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 CLIC1O00299 241 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 EIF1BO60739 113 aaKnown RBP21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 THBS1P07996 1170 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 HOXC12P31275 282 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 FADDQ13158 208 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 TAB1Q15750 504 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 LRRC75A-AS1Q8N1F1 130 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 APH1AQ96BI3 265 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 PAIP1Q9H074 479 aaKnown RBP21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 IFT52Q9Y366 437 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 C2CD3Q4AC94 2353 aa21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 FLNAP21333 2647 aaKnown RBP21.85■■□□□ 1.09
TNFRSF4-201ENST00000379236 IGKV3D-15A0A087WSY6 115 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 A0A096LPI6 279 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 CNOT4O95628 575 aaKnown RBP21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 CD3EP07766 207 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 GKN3PP0CG01 181 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 MRPL19P49406 292 aaKnown RBP21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 RGNQ15493 299 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 MAPK11Q15759 364 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 Q5PR19 223 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 RNF220Q5VTB9 566 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 TMEM171Q8WVE6 324 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 MUCL1Q96DR8 90 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 SPDL1Q96EA4 605 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 PRDM4Q9UKN5 801 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 RNF115Q9Y4L5 304 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 PRR14LQ5THK1 2151 aa21.84■■□□□ 1.09
TNFRSF4-201ENST00000379236 CLOCKO15516 846 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 MRPL33O75394 65 aaKnown RBP21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 FOSL1P15407 271 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 IDUAP35475 653 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 ZNF311Q5JNZ3 666 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 WBP2NLQ6ICG8 309 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 CCDC103Q8IW40 242 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 BBS10Q8TAM1 723 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 PERPQ96FX8 193 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 SPATA9Q9BWV2 254 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 ARID1AO14497 2285 aa21.83■■□□□ 1.09
TNFRSF4-201ENST00000379236 ZNF716A6NP11 495 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 HS3ST1O14792 307 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 PLAUP00749 431 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 IGHV3-9P01782 118 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 GPIP06744 558 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 GGT1P19440 569 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 PPIBP23284 216 aaKnown RBP21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 IRX1P78414 480 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 PPA1Q15181 289 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 FBXW9Q5XUX1 488 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 BLOC1S3Q6QNY0 202 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 CASP12Q6UXS9 341 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 AKAP1Q92667 903 aaKnown RBP eCLIP21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 TAPBPLQ9BX59 468 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 VIPAS39Q9H9C1 493 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 A4GALTQ9NPC4 353 aa21.82■■□□□ 1.08
TNFRSF4-201ENST00000379236 CIB4A0PJX0 185 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 CCT8L1PA6NM43 557 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 IGHV1-2P23083 117 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 SLC16A1P53985 500 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 SQLEQ14534 574 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 AGKQ53H12 422 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 PRAMEF8Q5VWM4 474 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 PRAMEF7Q5VXH5 474 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 SSX8Q7RTT4 187 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 MAL2Q969L2 176 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 ADAM19Q9H013 955 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 RABEP2Q9H5N1 569 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 CXorf56Q9H5V9 222 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 PARPBPQ9NWS1 579 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 SLC9A8Q9Y2E8 581 aa21.81■■□□□ 1.08
TNFRSF4-201ENST00000379236 ZC3H12DA2A288 527 aaKnown RBP21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 NUDT7P0C024 238 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 IMPDH2P12268 514 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 EDNRAP25101 427 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 ADSLP30566 484 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 ATP4BP51164 291 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 OR7A5Q15622 319 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 NCMAPQ5T1S8 102 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 OTUD3Q5T2D3 398 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 GCNT6Q5T4J0 391 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 FUNDC1Q8IVP5 155 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 CLIP4Q8N3C7 705 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 ZNF611Q8N823 705 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 MAGEB18Q96M61 343 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 TMEM204Q9BSN7 226 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 ASB6Q9NWX5 421 aa21.8■■□□□ 1.08
TNFRSF4-201ENST00000379236 UPB1Q9UBR1 384 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms