RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 GAS6Q14393 721 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 Q6ZS52 159 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 ZNF761Q86XN6 746 aaPredicted RBP8.79□□□□□ -1
TRIM39-202ENST00000376659 RAB43Q86YS6 212 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 SYS1Q8N2H4 156 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 ARL14Q8N4G2 192 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 SLC44A3Q8N4M1 653 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 SMIM19Q96E16 107 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 RANGRFQ9HD47 186 aaPredicted RBP8.79□□□□□ -1
TRIM39-202ENST00000376659 PLSCR3Q9NRY6 295 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 HRASLS2Q9NWW9 162 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 WSB2Q9NYS7 404 aaPredicted RBP8.79□□□□□ -1
TRIM39-202ENST00000376659 ZNF221Q9UK13 617 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 NCKAP1Q9Y2A7 1128 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 ALG5Q9Y673 324 aa8.79□□□□□ -1
TRIM39-202ENST00000376659 G3V3Q6 166 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 SOX30O94993 753 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 RCBTB2O95199 551 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 TXNDC12O95881 172 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 IGKV3-11P04433 115 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 ZNF10P21506 573 aaPredicted RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 IKZF1Q13422 519 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 CDK5R1Q15078 307 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 SF3A2Q15428 464 aaKnown RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 APOOLQ6UXV4 268 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 NUP54Q7Z3B4 507 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 TPRA1Q86W33 373 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 LRRC28Q86X40 367 aaPredicted RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 LINC00469Q8N7U9 141 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 SPACA7Q96KW9 195 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 CEP19Q96LK0 163 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 ABHD1Q96SE0 405 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 KRCC1Q9NPI7 259 aaPredicted RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 ACOXLQ9NUZ1 547 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 CHURC1-FNTBB4DL54 471 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 CASKO14936 926 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 ZNF749O43361 778 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 CTNSO60931 367 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 TRIM3O75382 744 aaPredicted RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 REM1O75628 298 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 NSA2O95478 260 aaKnown RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 PAHP00439 452 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 ASAH2BP0C7U1 165 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 BMP8BP34820 402 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 MAP2K3P46734 347 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 FNTBP49356 437 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 HCCSP53701 268 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 BTG2P78543 158 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 LTBQ06643 244 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 CD226Q15762 336 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 DEFB110Q30KQ9 67 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 TBRG1Q3YBR2 411 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 IL20RBQ6UXL0 311 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 RD3Q7Z3Z2 195 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 BMP8AQ7Z5Y6 402 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 ZNF321PQ8N8H1 164 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 OR4D9Q8NGE8 314 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 C16orf52Q8NHV5 167 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 C1orf216Q8TAB5 229 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 PTPMT1Q8WUK0 201 aaPredicted RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 RERGQ96A58 199 aaPredicted RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 UQCC2Q9BRT2 126 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 EXOSC3Q9NQT5 275 aaKnown RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 SEMA5BQ9P283 1151 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 LRIT1Q9P2V4 623 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 COMMD3Q9UBI1 195 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 KLHL21Q9UJP4 597 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 GSTK1Q9Y2Q3 226 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 MED31Q9Y3C7 131 aa8.78□□□□□ -1
TRIM39-202ENST00000376659 PCDHGA9Q9Y5G4 932 aaKnown RBP8.78□□□□□ -1
TRIM39-202ENST00000376659 C7orf66A4D0T2 115 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 EFCAB7A8K855 629 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 ARPC3O15145 178 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 GSTZ1O43708 216 aaPredicted RBP8.77□□□□□ -1
TRIM39-202ENST00000376659 MYL9P24844 172 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 SLC37A1P57057 533 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 TRAM1Q15629 374 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 ARHGAP11AQ6P4F7 1023 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 OR5H6Q8NGV6 325 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 OR4C3Q8NH37 302 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 LILRB4Q8NHJ6 448 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 PMEPA1Q969W9 287 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 ADIPOR1Q96A54 375 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 GSDMCQ9BYG8 508 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 RAB33BQ9H082 229 aa8.77□□□□□ -1
TRIM39-202ENST00000376659 ARPC4-TTLL3A0A0A6YYG9 625 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 A0A1W2PPC4 97 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 OR6C68A6NDL8 312 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 OR5K4A6NMS3 321 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 LRRN3E7EW58 273 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 PRR23D1E9PI22 279 aaPredicted RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 LYRM1O43325 122 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 SLC43A1O75387 559 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 PRR23D2P0DMB1 279 aaPredicted RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 ATF1P18846 271 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 GPR143P51810 404 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 NANOS3P60323 173 aaKnown RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 RUNX1T1Q06455 604 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 POU4F2Q12837 409 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 TATDN3Q17R31 274 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms