RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 TRIM2Q9C040 744 aa12.57□□□□□ -0.4
UBXN11-207ENST00000374223 TMBIM4Q9HC24 238 aa12.57□□□□□ -0.4
UBXN11-207ENST00000374223 GP6Q9HCN6 339 aa12.57□□□□□ -0.4
UBXN11-207ENST00000374223 SERINC1Q9NRX5 453 aa12.57□□□□□ -0.4
UBXN11-207ENST00000374223 SLC35A3Q9Y2D2 325 aa12.57□□□□□ -0.4
UBXN11-207ENST00000374223 ARFGEF3Q5TH69 2177 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 FRS3O43559 492 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 PGM3O95394 542 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 PMS2P2O95744 297 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 GUSBP08236 651 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 ITGA5P08648 1049 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 PAX1P15863 534 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 ACAA2P42765 397 aaKnown RBP12.56□□□□□ -0.4
UBXN11-207ENST00000374223 H3F3AP84243 136 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 HOXC5Q00444 222 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 EPS8Q12929 822 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 P2RY6Q15077 328 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 PPA1Q15181 289 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 ZNF672Q499Z4 452 aaPredicted RBP12.56□□□□□ -0.4
UBXN11-207ENST00000374223 LRRC74BQ6ZQY2 392 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 GRINAQ7Z429 371 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 COMTD1Q86VU5 262 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 ZNF100Q8IYN0 542 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 ZIC4Q8N9L1 334 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 SMAP2Q8WU79 429 aaPredicted RBP12.56□□□□□ -0.4
UBXN11-207ENST00000374223 WDR60Q8WVS4 1066 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 TMEM234Q8WY98 164 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 HTRA1Q92743 480 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 TRNT1Q96Q11 434 aaKnown RBP12.56□□□□□ -0.4
UBXN11-207ENST00000374223 REPIN1Q9BWE0 567 aaKnown RBP12.56□□□□□ -0.4
UBXN11-207ENST00000374223 EXOSC3Q9NQT5 275 aaKnown RBP12.56□□□□□ -0.4
UBXN11-207ENST00000374223 POLE3Q9NRF9 147 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 THAP1Q9NVV9 213 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 ADAM21Q9UKJ8 722 aa12.56□□□□□ -0.4
UBXN11-207ENST00000374223 CHD3Q12873 2000 aaKnown RBP12.55□□□□□ -0.4
UBXN11-207ENST00000374223 RTTNQ86VV8 2226 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 RNF223E7ERA6 249 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 AGR2O95994 175 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 IGHV4-39P01824 125 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 NR2F1P10589 423 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 ACVR1BP36896 505 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 ZNF83P51522 516 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 DPY19L1Q2PZI1 675 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 BEND6Q5SZJ8 279 aaPredicted RBP12.55□□□□□ -0.4
UBXN11-207ENST00000374223 SLC2A7Q6PXP3 512 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 LRRC34Q8IZ02 419 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 UBE2J2Q8N2K1 259 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 TMEM99Q8N816 258 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 WDR31Q8NA23 367 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 VPS37AQ8NEZ2 397 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 ZNF385AQ96PM9 386 aaKnown RBP12.55□□□□□ -0.4
UBXN11-207ENST00000374223 PRR14Q9BWN1 585 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 POTEKPQ9BYX7 375 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 MANSC1Q9H8J5 431 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 SLC7A10Q9NS82 523 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 SLAMF8Q9P0V8 285 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 LIPT1Q9Y234 373 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 NOSIPQ9Y314 301 aaKnown RBP12.55□□□□□ -0.4
UBXN11-207ENST00000374223 FLVCR1Q9Y5Y0 555 aa12.55□□□□□ -0.4
UBXN11-207ENST00000374223 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 E7EQL1 145 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 PDLIM1O00151 329 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 RFXANKO14593 260 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 ABCD4O14678 606 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 AKR7A3O95154 331 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 BCHEP06276 602 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 THBS1P07996 1170 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 TFPTP0C1Z6 253 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 HOXB9P17482 250 aaPredicted RBP12.54□□□□□ -0.4
UBXN11-207ENST00000374223 CSNK2A1P68400 391 aaPredicted RBP12.54□□□□□ -0.4
UBXN11-207ENST00000374223 GABRA6Q16445 453 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 PDCD4Q53EL6 469 aaKnown RBP12.54□□□□□ -0.4
UBXN11-207ENST00000374223 TSPO2Q5TGU0 170 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 FBXW9Q5XUX1 488 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 OR52P1PQ8NH57 321 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
UBXN11-207ENST00000374223 SLC38A5Q8WUX1 472 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 MAL2Q969L2 176 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 FBXW5Q969U6 566 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 TRAF4Q9BUZ4 470 aaPredicted RBP12.54□□□□□ -0.4
UBXN11-207ENST00000374223 ADAM19Q9H013 955 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 PAIP1Q9H074 479 aaKnown RBP12.54□□□□□ -0.4
UBXN11-207ENST00000374223 CXorf56Q9H5V9 222 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 MTHFD2LQ9H903 347 aaPredicted RBP12.54□□□□□ -0.4
UBXN11-207ENST00000374223 SLCO1B3Q9NPD5 702 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 TMEM181Q9P2C4 612 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 SLC25A15Q9Y619 301 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 DSPPQ9NZW4 1301 aa12.54□□□□□ -0.4
UBXN11-207ENST00000374223 CDHR4A6H8M9 788 aa12.53□□□□□ -0.4
UBXN11-207ENST00000374223 CRLF1O75462 422 aa12.53□□□□□ -0.4
UBXN11-207ENST00000374223 SLC22A3O75751 556 aa12.53□□□□□ -0.4
UBXN11-207ENST00000374223 IL7RP16871 459 aa12.53□□□□□ -0.4
UBXN11-207ENST00000374223 GGT1P19440 569 aa12.53□□□□□ -0.4
UBXN11-207ENST00000374223 CRATP43155 626 aa12.53□□□□□ -0.4
UBXN11-207ENST00000374223 P2RY4P51582 365 aa12.53□□□□□ -0.4
UBXN11-207ENST00000374223 POLR2HP52434 150 aaKnown RBP12.53□□□□□ -0.4
UBXN11-207ENST00000374223 SLC16A1P53985 500 aa12.53□□□□□ -0.4
UBXN11-207ENST00000374223 RPS4XP62701 263 aaKnown RBP12.53□□□□□ -0.4
UBXN11-207ENST00000374223 HPCAP84074 193 aa12.53□□□□□ -0.4
UBXN11-207ENST00000374223 CEACAM7Q14002 265 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms