RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 HMGCLP35914 325 aa15□□□□□ -0.01
COL18A1-203ENST00000359759 OPCMLQ14982 345 aa15□□□□□ -0.01
COL18A1-203ENST00000359759 SLC30A7Q8NEW0 376 aa15□□□□□ -0.01
COL18A1-203ENST00000359759 MDGA1Q8NFP4 955 aa15□□□□□ -0.01
COL18A1-203ENST00000359759 OR52H1Q8NGJ2 320 aa15□□□□□ -0.01
COL18A1-203ENST00000359759 OR56B4Q8NH76 319 aa15□□□□□ -0.01
COL18A1-203ENST00000359759 ADOQ96SZ5 270 aa15□□□□□ -0.01
COL18A1-203ENST00000359759 SORT1Q99523 831 aa15□□□□□ -0.01
COL18A1-203ENST00000359759 MCOLN1Q9GZU1 580 aa15□□□□□ -0.01
COL18A1-203ENST00000359759 ACOD1A6NK06 481 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 NFKBIEO00221 500 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 HSD17B6O14756 317 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 HLA-DOBP13765 273 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 TMEM244Q5VVB8 128 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 GDPGP1Q6ZNW5 385 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 DVL3Q92997 716 aaPredicted RBP14.99□□□□□ -0.01
COL18A1-203ENST00000359759 BORCS6Q96GS4 357 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 TMEM82A0PJX8 343 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 SNAI1O95863 264 aaPredicted RBP14.99□□□□□ -0.01
COL18A1-203ENST00000359759 P2RY2P41231 377 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 RABIFP47224 123 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 P2RX1P51575 399 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 SELPLGQ14242 412 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 TCTE1Q5JU00 501 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 TRAPPC2LQ9UL33 140 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 LAMTOR5O43504 91 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 PSMB5P28074 263 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 TTC9BQ8N6N2 239 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 OR13C2Q8NGS9 318 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 SECTM1Q8WVN6 248 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 OR2M2Q96R28 347 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 OR11A1Q9GZK7 315 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 NIPAL2Q9H841 368 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 PTRH2Q9Y3E5 179 aaKnown RBP14.99□□□□□ -0.01
COL18A1-203ENST00000359759 PRSS21Q9Y6M0 314 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 P2RX6O15547 441 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 GABRB3P28472 473 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 TMEM71Q6P5X7 295 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 LACC1Q8IV20 430 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 SLC43A2Q8N370 569 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 C3orf30Q96M34 536 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 URGCP-MRPS24S4R325 110 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 LOC102725191A0A1B0GVB3 256 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 IDUAP35475 653 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 SIX1Q15475 284 aaPredicted RBP14.99□□□□□ -0.01
COL18A1-203ENST00000359759 PGGHGQ32M88 737 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 SLC35D2Q76EJ3 337 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.99□□□□□ -0.011e-6■■■□□ 17.7
COL18A1-203ENST00000359759 ACOT4Q8N9L9 421 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 SDR39U1Q9NRG7 319 aaPredicted RBP14.99□□□□□ -0.01
COL18A1-203ENST00000359759 PISDQ9UG56 409 aa14.99□□□□□ -0.01
COL18A1-203ENST00000359759 TRBV4-1A0A0J9YWV2 114 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 ZCWPW2A0A1B0GU75 182 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 C17orf112F2Z3M2 114 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 ACP2P11117 423 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 NRARPQ7Z6K4 114 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 PDZD3Q86UT5 571 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 ADAMTS16Q8TE57 1224 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 ANKRD9Q96BM1 317 aaPredicted RBP14.98□□□□□ -0.01
COL18A1-203ENST00000359759 HHLA2Q9UM44 414 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 USP22Q9UPT9 525 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 GJB3O75712 270 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 NSA2O95478 260 aaKnown RBP14.98□□□□□ -0.01
COL18A1-203ENST00000359759 MRPS10P82664 201 aaKnown RBP14.98□□□□□ -0.01
COL18A1-203ENST00000359759 RUNX3Q13761 415 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 IL34Q6ZMJ4 242 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 MKXQ8IYA7 352 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 LMNTD1Q8N9Z9 388 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 OR5D18Q8NGL1 313 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 ACOT11Q8WXI4 607 aaPredicted RBP14.98□□□□□ -0.01
COL18A1-203ENST00000359759 BABAM2Q9NXR7 383 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 T-ENOLP0DO92 83 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 PKLRP30613 574 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 EMP3P54852 163 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 TCEAL1Q15170 157 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 CMPK2Q5EBM0 449 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 FCRL1Q96LA6 429 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 LRFN5Q96NI6 719 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 AQP7O14520 342 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 NTSR1P30989 418 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 ATP1B3P54709 279 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 MFGE8Q08431 387 aaPredicted RBP14.98□□□□□ -0.01
COL18A1-203ENST00000359759 IKZF1Q13422 519 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 RTP2Q5QGT7 225 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 SERPINA11Q86U17 422 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 CELF2-AS1Q8N7Q2 184 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 RPL3LQ92901 407 aaKnown RBP14.98□□□□□ -0.01
COL18A1-203ENST00000359759 SLC2A11Q9BYW1 496 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 C1GALT1Q9NS00 363 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 QPCTLQ9NXS2 382 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 A0A0D9SG52 128 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 OR13C7P0DN81 318 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 BCKDHBP21953 392 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 ZP2Q05996 745 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 FAM199XQ6PEV8 388 aaPredicted RBP14.98□□□□□ -0.01
COL18A1-203ENST00000359759 RFPL4BQ6ZWI9 263 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 MTCH1Q9NZJ7 389 aa14.98□□□□□ -0.01
COL18A1-203ENST00000359759 RAB19A4D1S5 217 aa14.97□□□□□ -0.01
COL18A1-203ENST00000359759 PPP6CO00743 305 aa14.97□□□□□ -0.01
COL18A1-203ENST00000359759 NFYAP23511 347 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms