RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 C10orf53Q8N6V4 93 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR1J4Q8NGS1 313 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 KTI12Q96EK9 354 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 C1GALT1C1Q96EU7 318 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 DNAJA3Q96EY1 480 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 GNRHR2Q96P88 292 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SIGLEC12Q96PQ1 595 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TNFRSF13CQ96RJ3 184 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ENKD1Q9H0I2 346 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLC25A19Q9HC21 320 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 GPR83Q9NYM4 423 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TVP23BQ9NYZ1 205 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 POLHQ9Y253 713 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SIGLEC7Q9Y286 467 aa13.37□□□□□ -0.27
CDK5RAP3-201ENST00000338399 KLK10O43240 276 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TLX3O43711 291 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FMO3P31513 532 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 RPS5P46782 204 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SMSP52788 366 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 DLX5P56178 289 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SOX8P57073 446 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 LTBQ06643 244 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZNF74Q16587 644 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZBED5Q49AG3 693 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 AGAP7PQ5VUJ5 663 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PTCHD4Q6ZW05 846 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR4Q3Q8NH05 313 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 RHOXF1Q8NHV9 184 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 APH1BQ8WW43 257 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 HDAC2Q92769 488 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TAAR8Q969N4 342 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 RELTQ969Z4 430 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TMEM41AQ96HV5 264 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 AGAP4Q96P64 663 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MOGAT1Q96PD6 335 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 PCDHGB6Q9Y5F9 930 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 HTR3EA5X5Y0 456 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FAM47E-STBD1D6RA91 191 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ETV2O00321 342 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 EFSO43281 561 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 HCN1O60741 890 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TRIM3O75382 744 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 WBP4O75554 376 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 NEURL1O76050 574 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 RCBTB2O95199 551 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 IGF2P01344 180 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 BMP7P18075 431 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 APOBEC1P41238 236 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CCL11P51671 97 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 GPR85P60893 370 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FOXK1P85037 733 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FHL1Q13642 323 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR1C1Q15619 314 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SMN1Q16637 294 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 DEFB109BQ30KR1 87 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CRTC2Q53ET0 693 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLC25A53Q5H9E4 307 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 C1QL3Q5VWW1 255 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TIGD3Q6B0B8 471 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SMARCD3Q6STE5 483 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 THSD4Q6ZMP0 1018 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 BPIFB6Q8NFQ5 453 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 POC1BQ8TC44 478 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MRGPRX4Q96LA9 322 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 IL4I1Q96RQ9 567 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 YTHDF1Q9BYJ9 559 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TIMMDC1Q9NPL8 285 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 NANSQ9NR45 359 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 DEPPQ9NTK1 212 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CHRNA9Q9UGM1 479 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SCOCQ9UIL1 159 aa13.36□□□□□ -0.27
CDK5RAP3-201ENST00000338399 AKAP13Q12802 2813 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 FREM3P0C091 2139 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TRAV36DV7A0A075B6V5 113 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 A8MVM7 634 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 GABRB1P18505 474 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLC9A3P48764 834 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 RBM48Q5RL73 367 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 RPL13AP3Q6NVV1 102 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TCEANCQ8N8B7 351 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ATP6V1C2Q8NEY4 427 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR52L1Q8NGH7 329 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR5M1Q8NGP8 315 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 OR11A1Q9GZK7 315 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZNF552Q9H707 407 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MCCC2Q9HCC0 563 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 ZNF337Q9Y3M9 751 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 NCKAP5O14513 1909 aa13.35□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SLC1A7O00341 560 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 XPNPEP2O43895 674 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 EFNA2O43921 213 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 NPIPB7O75200 414 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 IL11P20809 199 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CNR1P21554 472 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CRHBPP24387 322 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 DPP4P27487 766 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CDH15P55291 814 aa13.34□□□□□ -0.27
CDK5RAP3-201ENST00000338399 SNAPC1Q16533 368 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms