RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 MSX1P28360 303 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 MLF1P58340 268 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 RPS4XP62701 263 aaKnown RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 ZNF91Q05481 1191 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 TBCEQ15813 527 aaPredicted RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 ZNF74Q16587 644 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 BICRALQ6AI39 1079 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 GRINAQ7Z429 371 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 RPS19BP1Q86WX3 136 aaKnown RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 DND1Q8IYX4 353 aaKnown RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 CYP4Z2PQ8N1L4 340 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 SECISBP2Q96T21 854 aaKnown RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 CPNE5Q9HCH3 593 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 P4HTMQ9NXG6 502 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 KLRF1Q9NZS2 232 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 BAIAP2Q9UQB8 552 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 ZNF337Q9Y3M9 751 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 WIF1Q9Y5W5 379 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 CHCHD2Q9Y6H1 151 aaPredicted RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 AHCTF1Q8WYP5 2266 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 MUC6Q6W4X9 2439 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 PROB1E7EW31 1015 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 LRRN3E7EW58 273 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 ETV2O00321 342 aaPredicted RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 TM4SF5O14894 197 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 PRODHO43272 600 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 MAN1A2O60476 641 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 CASP3P42574 277 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 MAP2K4P45985 399 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 POLR2HP52434 150 aaKnown RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 ROR2Q01974 943 aaKnown RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 Q0VFX4 171 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 SNTA1Q13424 505 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 IL10RAQ13651 578 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 IRF3Q14653 427 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 AADACL4Q5VUY2 407 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 H3F3CQ6NXT2 135 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 STX19Q8N4C7 294 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 LRRC17Q8N6Y2 441 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 ANKK1Q8NFD2 765 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 TMEM234Q8WY98 164 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 ST8SIA1Q92185 356 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 NTNG2Q96CW9 530 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 FRMD6Q96NE9 622 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 CDCA4Q9BXL8 241 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 FN3KQ9H479 309 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 CDCP1Q9H5V8 836 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 METTL7AQ9H8H3 244 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 SDHAF3Q9NRP4 125 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 MRPS18AQ9NVS2 196 aaKnown RBP14.06□□□□□ -0.16
LIMS1-202ENST00000338045 GPR52Q9Y2T5 361 aa14.06□□□□□ -0.16
LIMS1-202ENST00000338045 PCSK5Q92824 1860 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 PCNX3Q9H6A9 2034 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 LOC101059948A0A1B0GTJ6 334 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 C2orf72A6NCS6 295 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 ZNF99A8MXY4 864 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-202ENST00000338045 ZNF701M0R085 212 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-202ENST00000338045 TP53I11O14683 189 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 INMTO95050 263 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 NDUFB2O95178 105 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 WISP1O95388 367 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 FADS2O95864 444 aaKnown RBP14.05□□□□□ -0.16
LIMS1-202ENST00000338045 CXCR1P25024 350 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 SLC6A6P31641 620 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 SSR4P51571 173 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 MLLT10P55197 1068 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 GP2P55259 537 aaKnown RBP14.05□□□□□ -0.16
LIMS1-202ENST00000338045 TMEM44Q2T9K0 475 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 CNPY1Q3B7I2 92 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 SYT6Q5T7P8 510 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-202ENST00000338045 ADGRG3Q86Y34 549 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 RORBQ92753 470 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 PLEKHA8Q96JA3 519 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 SH2D2AQ9NP31 389 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 CMC2Q9NRP2 79 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 HRH3Q9Y5N1 445 aa14.05□□□□□ -0.16
LIMS1-202ENST00000338045 MASP2O00187 686 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 NPIPB7O75200 414 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 SLC2A10O95528 541 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 SERPINA7P05543 415 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 ASAH2BP0C7U1 165 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 CD82P27701 267 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 HTR3AP46098 478 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 GABREP78334 506 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 FOXK2Q01167 660 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 ZNF362Q5T0B9 420 aaPredicted RBP14.04□□□□□ -0.16
LIMS1-202ENST00000338045 UBE2UQ5VVX9 321 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 NXNL2Q5VZ03 156 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 FCRLBQ6BAA4 426 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 OR5M10Q6IEU7 315 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 ADAMTS17Q8TE56 1095 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 ASB15Q8WXK1 588 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 FCGR1BQ92637 280 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 KTI12Q96EK9 354 aaPredicted RBP14.04□□□□□ -0.16
LIMS1-202ENST00000338045 IFT27Q9BW83 186 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 MED11Q9P086 117 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 PPP4R1LQ9P1A2 415 aa14.04□□□□□ -0.16
LIMS1-202ENST00000338045 RSL24D1Q9UHA3 163 aaKnown RBP14.04□□□□□ -0.16
LIMS1-202ENST00000338045 HIF3AQ9Y2N7 669 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms