RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TMPRSS11EQ9UL52 423 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 MROH6A6NGR9 719 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 NME2P1O60361 137 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 UBBP0CG47 229 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 UBCP0CG48 685 aaKnown RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 NUDT1P36639 197 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 TAGLN2P37802 199 aaKnown RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 NIPAL3Q6P499 406 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 AGPAT4Q9NRZ5 378 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 CNOT11Q9UKZ1 510 aaKnown RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 SULT2B1O00204 365 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 TNFRSF10AO00220 468 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 GPR37L1O60883 481 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 SNAI1O95863 264 aaPredicted RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 PTGER4P35408 488 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 OR2B11Q5JQS5 317 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 RPL13AP3Q6NVV1 102 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 MAMDC4Q6UXC1 1216 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 NKX3-1Q99801 234 aaPredicted RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 BABAM2Q9NXR7 383 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 BAZ2AQ9UIF9 1905 aaKnown RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 ZNF840PA6NDX5 716 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 APLNRP35414 380 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 TSFMP43897 325 aaKnown RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 RPL23AP62750 156 aaKnown RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 HTR4Q13639 388 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 OR8G2PQ6IF36 304 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 DPPA4Q7L190 304 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 ZNF75AQ96N20 296 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 C11orf54Q9H0W9 315 aaPredicted RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 POPDC3Q9HBV1 291 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 SEMG1P04279 462 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 SYPP08247 313 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 CSF1P09603 554 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 PCSK6P29122 969 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 GDNFP39905 211 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 NPY4RP50391 375 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 RPL11P62913 178 aaKnown RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 HBA1P69905 142 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 ATPAF1Q5TC12 328 aaPredicted RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 ZNF468Q5VIY5 522 aaPredicted RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 ELP4Q96EB1 424 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 SYT17Q9BSW7 474 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 PTDSS2Q9BVG9 487 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 CHRDQ9H2X0 955 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 UNKLQ9H9P5 680 aaKnown RBP11.55□□□□□ -0.56
ABCA3-201ENST00000301732 MTCH1Q9NZJ7 389 aa11.55□□□□□ -0.56
ABCA3-201ENST00000301732 CROCCQ5TZA2 2017 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 CTSCP53634 463 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 CST6Q15828 149 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 ANKRD34AQ69YU3 496 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 ETFRF1Q6IPR1 90 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 SBSNQ6UWP8 590 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 SPTSSAQ969W0 71 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 SFXN2Q96NB2 322 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 OR7D2Q96RA2 312 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 ADAM19Q9H013 955 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 DMRT3Q9NQL9 472 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 GLTPD2A6NH11 291 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 E7ESA3 106 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 OR1Q1Q15612 314 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 NTF3P20783 257 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 KITLGP21583 273 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 SOX9P48436 509 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 KIAA0319Q5VV43 1072 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 PGAP1Q75T13 922 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 OVCH1Q7RTY7 1134 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 RNF170Q96K19 258 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 DCLRE1CQ96SD1 692 aaKnown RBP11.54□□□□□ -0.56
ABCA3-201ENST00000301732 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.54□□□□□ -0.56
ABCA3-201ENST00000301732 NXT1Q9UKK6 140 aaKnown RBP11.54□□□□□ -0.56
ABCA3-201ENST00000301732 IQGAP1P46940 1657 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 SLC9B1P1A6NJY1 282 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 MPC1LP0DKB6 136 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 HOXA1P49639 335 aaPredicted RBP11.54□□□□□ -0.56
ABCA3-201ENST00000301732 HTRA3P83110 453 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 PLA2G7Q13093 441 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 EXOSC2Q13868 293 aaKnown RBP11.54□□□□□ -0.56
ABCA3-201ENST00000301732 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
ABCA3-201ENST00000301732 COX20Q5RI15 118 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 EMC10Q5UCC4 262 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 SIAH3Q8IW03 269 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 SVBPQ8N300 66 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 IGSF21Q96ID5 467 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 TXNDC15Q96J42 360 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 FBXO8Q9NRD0 319 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 DUX1O43812 170 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 CLDN1O95832 211 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 EPHA4P54764 986 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 RAB33AQ14088 237 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 SLC6A19Q695T7 634 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 RHOUQ7L0Q8 258 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 LILRA2Q8N149 483 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 OR9A4Q8NGU2 314 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 MITD1Q8WV92 249 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 L3HYPDHQ96EM0 354 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 C1QTNF6Q9BXI9 259 aa11.54□□□□□ -0.56
ABCA3-201ENST00000301732 NIPAL2Q9H841 368 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms