RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 NAT1P18440 290 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 CXCL2P19875 107 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 VN1R4Q7Z5H5 301 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 ZAR1Q86SH2 424 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 MEIOBQ8N635 442 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 COQ8AQ8NI60 647 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 SMIM19Q96E16 107 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 FKRPQ9H9S5 495 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 SLC27A6Q9Y2P4 619 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 PCDHGA9Q9Y5G4 932 aaKnown RBP16.09■□□□□ 0.17
TRAM1-201ENST00000262213 CACNA1CQ13936 2221 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 TBC1D3EA0A087X179 549 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 TRAV1-2A0A0B4J238 106 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 A0A1B0GVT2 93 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 GXYLT2A0PJZ3 443 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 RNGTTO60942 597 aaKnown RBP16.09■□□□□ 0.17
TRAM1-201ENST00000262213 MAT2AP31153 395 aaKnown RBP16.09■□□□□ 0.17
TRAM1-201ENST00000262213 ARFIP1P53367 373 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 SIRPAP78324 504 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 DYRK1AQ13627 763 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 UBE2NLQ5JXB2 153 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 STPG1Q5TH74 334 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 NHLRC1Q6VVB1 395 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 ETFBKMTQ8IXQ9 262 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 ZBTB44Q8NCP5 570 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 CNOT9Q92600 299 aaKnown RBP16.09■□□□□ 0.17
TRAM1-201ENST00000262213 CXorf58Q96LI9 332 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 LYARQ9NX58 379 aaKnown RBP16.09■□□□□ 0.17
TRAM1-201ENST00000262213 POMT2Q9UKY4 750 aa16.09■□□□□ 0.17
TRAM1-201ENST00000262213 NUPL2O15504 423 aaKnown RBP16.08■□□□□ 0.16
TRAM1-201ENST00000262213 ATP1B1P05026 303 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 DBIP07108 87 aaKnown RBP16.08■□□□□ 0.16
TRAM1-201ENST00000262213 NID1P14543 1247 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 HIST1H1CP16403 213 aaKnown RBP16.08■□□□□ 0.16
TRAM1-201ENST00000262213 RPS11P62280 158 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRAM1-201ENST00000262213 RUNX2Q13950 521 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 RPE65Q16518 533 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 OR5M10Q6IEU7 315 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 RNF113BQ8IZP6 322 aaKnown RBP16.08■□□□□ 0.16
TRAM1-201ENST00000262213 OR52B4Q8NGK2 314 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 OR6K6Q8NGW6 343 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 ZNRF4Q8WWF5 429 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 C7orf50Q9BRJ6 194 aaKnown RBP16.08■□□□□ 0.16
TRAM1-201ENST00000262213 SEMA4CQ9C0C4 833 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 MS4A7Q9GZW8 240 aaPredicted RBP16.08■□□□□ 0.16
TRAM1-201ENST00000262213 NOX3Q9HBY0 568 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 NRIP3Q9NQ35 241 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 ADAM18Q9Y3Q7 739 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 A0A1W2PP55 124 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 SELENOFO60613 162 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 SIX6O95475 246 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 FGF19O95750 216 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 DRD3P35462 400 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 KIAA1024LP59773 190 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 PSMA6P60900 246 aaKnown RBP16.08■□□□□ 0.16
TRAM1-201ENST00000262213 ACTC1P68032 377 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 ACTA1P68133 377 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 TNFRSF17Q02223 184 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 FGL2Q14314 439 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 CEBPEQ15744 281 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 ALKAL2Q6UX46 152 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 C3P1Q6ZMU1 363 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 TMPRSS11FQ6ZWK6 438 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 PRSS42Q7Z5A4 293 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 SLC35F2Q8IXU6 374 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 OR2L13Q8N349 312 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 ARPC5LQ9BPX5 153 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 RNF208Q9H0X6 261 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 TMEM27Q9HBJ8 222 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 IER3IP1Q9Y5U9 82 aa16.08■□□□□ 0.16
TRAM1-201ENST00000262213 LGALS8O00214 317 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 AGR2O95994 175 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 NGFRP08138 427 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 DCTDP32321 178 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 GABRA3P34903 492 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 HTR4Q13639 388 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 GRAMD2AQ8IUY3 354 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 C12orf76Q8N812 135 aaPredicted RBP16.07■□□□□ 0.16
TRAM1-201ENST00000262213 MRPL43Q8N983 215 aaKnown RBP16.07■□□□□ 0.16
TRAM1-201ENST00000262213 C1orf216Q8TAB5 229 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 ZNF350Q9GZX5 532 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 COPS3Q9UNS2 423 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 hCG_1807616A0A1W2PRN6 198 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 GSTZ1O43708 216 aaPredicted RBP16.07■□□□□ 0.16
TRAM1-201ENST00000262213 PRICKLE3O43900 615 aaPredicted RBP16.07■□□□□ 0.16
TRAM1-201ENST00000262213 KRT33AO76009 404 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 UCHL1P09936 223 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 SRMP19623 302 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 RAG2P55895 527 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 RPS15P62841 145 aaKnown RBP16.07■□□□□ 0.16
TRAM1-201ENST00000262213 LINC00303Q3SY05 128 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 KIAA1324Q6UXG2 1013 aaKnown RBP16.07■□□□□ 0.16
TRAM1-201ENST00000262213 RD3Q7Z3Z2 195 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 ADGRG3Q86Y34 549 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 CMIPQ8IY22 773 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 TEX19Q8NA77 164 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 ZNF784Q8NCA9 323 aaPredicted RBP16.07■□□□□ 0.16
TRAM1-201ENST00000262213 LCN9Q8WX39 176 aa16.07■□□□□ 0.16
TRAM1-201ENST00000262213 CNN2Q99439 309 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms