RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 LAPTM4AQ15012 233 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 RPUSD3Q6P087 351 aaKnown RBP11.71□□□□□ -0.53
LSM8-201ENST00000249299 PRICKLE2Q7Z3G6 844 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 RNF217Q8TC41 542 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 OSTF1Q92882 214 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 DDIT4LQ96D03 193 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 SGTBQ96EQ0 304 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 ADI1Q9BV57 179 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 GRIP2Q9C0E4 1043 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 ADNPQ9H2P0 1102 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 FKRPQ9H9S5 495 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 ACKR4Q9NPB9 350 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 TUBA8Q9NY65 449 aaPredicted RBP11.71□□□□□ -0.53
LSM8-201ENST00000249299 IL20Q9NYY1 176 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 DKKL1Q9UK85 242 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 HDGFL3Q9Y3E1 203 aa11.71□□□□□ -0.53
LSM8-201ENST00000249299 URB1O60287 2271 aaKnown RBP11.71□□□□□ -0.54
LSM8-201ENST00000249299 NINQ8N4C6 2090 aa11.71□□□□□ -0.54
LSM8-201ENST00000249299 CPAMD8Q8IZJ3 1885 aa11.71□□□□□ -0.54
LSM8-201ENST00000249299 GJE1A6NN92 205 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 ACOT7O00154 380 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 HCN1O60741 890 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 SNAP29O95721 258 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 IFI30P13284 250 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 HK1P19367 917 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 CHMP24386 653 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 CAPGP40121 348 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 RAC1P63000 192 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 ADARB1P78563 741 aaKnown RBP11.7□□□□□ -0.54
LSM8-201ENST00000249299 EGR4Q05215 589 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 CRYZQ08257 329 aaKnown RBP11.7□□□□□ -0.54
LSM8-201ENST00000249299 FOXF1Q12946 379 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 NPRL3Q12980 569 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 INPP5JQ15735 1006 aaPredicted RBP11.7□□□□□ -0.54
LSM8-201ENST00000249299 TBR1Q16650 682 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 SLC36A3Q495N2 470 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 FAM69AQ5T7M9 428 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 KLHL17Q6TDP4 642 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 Q6ZS92 163 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 GALNTL5Q7Z4T8 443 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 ZNF555Q8NEP9 628 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 MFSD8Q8NHS3 518 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 POC1BQ8TC44 478 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 ZNF524Q96C55 264 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 HRASLS5Q96KN8 279 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 JSRP1Q96MG2 331 aaPredicted RBP11.7□□□□□ -0.54
LSM8-201ENST00000249299 NIPSNAP1Q9BPW8 284 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 KLHDC3Q9BQ90 382 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 TACO1Q9BSH4 297 aaKnown RBP11.7□□□□□ -0.54
LSM8-201ENST00000249299 ANKRD60Q9BZ19 345 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 NDEL1Q9GZM8 345 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 TOR3AQ9H497 397 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 ZNF703Q9H7S9 590 aaPredicted RBP11.7□□□□□ -0.54
LSM8-201ENST00000249299 FAM118AQ9NWS6 357 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 REV1Q9UBZ9 1251 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 ZNF229Q9UJW7 825 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 VDAC3Q9Y277 283 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 TRAPPC4Q9Y296 219 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 ZNF337Q9Y3M9 751 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 CORINQ9Y5Q5 1042 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 AP4B1Q9Y6B7 739 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 HSPE1-MOB4S4R3N1 261 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 MED13Q9UHV7 2174 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 ASPMQ8IZT6 3477 aa11.7□□□□□ -0.54
LSM8-201ENST00000249299 ENO4A6NNW6 628 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 C17orf51A8MQB3 221 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 EFCAB9A8MZ26 197 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 DNPH1O43598 174 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 OR7A10O76100 309 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 AHSA1O95433 338 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 TSPAN19P0C672 248 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 MEOX1P50221 254 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 PRPS1P60891 318 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 KCNAB2Q13303 367 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 BCL2A1Q16548 175 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 ZNF74Q16587 644 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 SYT14P1Q58G82 188 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 C1orf140Q5VVS0 124 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 FAM109AQ8N4B1 249 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 ZCCHC14Q8WYQ9 949 aaKnown RBP11.69□□□□□ -0.54
LSM8-201ENST00000249299 GTPBP3Q969Y2 492 aaKnown RBP11.69□□□□□ -0.54
LSM8-201ENST00000249299 PITX2Q99697 317 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 TEX12Q9BXU0 123 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 TTTY12Q9BZ98 90 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 NDRG4Q9ULP0 352 aaKnown RBP11.69□□□□□ -0.54
LSM8-201ENST00000249299 LRCH1Q9Y2L9 728 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 HRH3Q9Y5N1 445 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 CDH10Q9Y6N8 788 aa11.69□□□□□ -0.54
LSM8-201ENST00000249299 A0A0G2JMM0 328 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 LOC100130705A0A1B0GUX0 176 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 A0A1W2PPB8 328 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 A0A1W2PRS3 328 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 TMEM72A0PK05 275 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 UNC119BA6NIH7 251 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 KIR3DP1A8MWS1 328 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 C1QTNF9BB2RNN3 333 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 G3V3Y1 287 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 TAF4O00268 1085 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 PTP4A3O75365 173 aa11.68□□□□□ -0.54
LSM8-201ENST00000249299 ASAH2BP0C7U1 165 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms