RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Enkd1Q7TSV9 346 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 AasdhQ80WC9 1100 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Rhox11Q810N8 206 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tspan9Q8BJU2 239 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Ndc1Q8VCB1 673 aaKnown RBP9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Wdr45Q91VM3 360 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tmem35aQ9D328 167 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Ift22Q9DAI2 185 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr44Q9EQB8 314 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Yipf7Q9JIM5 254 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Cyp2d22Q9JKY7 500 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Slc7a7Q9Z1K8 510 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Ccl27Q9Z1X0 120 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Plxna3P70208 1872 aa9.07□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Zfp442A2AQA0 667 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm8765B7ZWJ3 1017 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm906Q3V0M1 1017 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Lrrn1Q61809 716 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr304Q7TS03 333 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Adamtsl2Q7TSK7 957 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Jazf1Q80ZQ5 243 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Eif4e2Q8BMB3 245 aaKnown RBP9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Casc3Q8K3W3 698 aaKnown RBP9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Fahd1Q8R0F8 227 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 AspaQ8R3P0 312 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Sh3bp4Q921I6 962 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Otub2Q9CQX0 234 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Prelid3bQ9CYY7 195 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 PmpcaQ9DC61 524 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Nqo2Q9JI75 231 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 H2afb1S4R1E0 115 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr576A0A0G2JFH3 312 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Fam83cA2ARK0 776 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm14085A2AWR5 660 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr115B2RTB9 312 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 SelenonD3Z2R5 557 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Kcnmb3E9Q7U0 239 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gp6P0C191 313 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 CckbrP56481 453 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 TsxP70675 144 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Lcn3Q62471 182 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Rspo2Q8BFU0 243 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Pced1bQ8BGX1 433 aaKnown RBP9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Fam180aQ8BR21 173 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Yipf6Q8BR70 236 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Rdh1Q8CGV4 317 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Slc35b4Q8CIA5 331 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Alkbh3Q8K1E6 286 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr516Q8VFZ5 314 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Cts3Q91ZD5 332 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Rpl14Q9CR57 217 aaKnown RBP9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 CalyQ9DCA7 226 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Vmn1r53Q9EP93 310 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2abC0HKE1 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2acC0HKE2 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2adC0HKE3 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2aeC0HKE4 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2agC0HKE5 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2aiC0HKE6 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2anC0HKE7 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2aoC0HKE8 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2apC0HKE9 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 EmdO08579 259 aaKnown RBP9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Plin4O88492 1403 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Anxa2P07356 339 aaKnown RBP9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Fxyd2Q04646 70 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Spc25Q3UA16 226 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Ppp5cQ60676 499 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Il10rbQ61190 349 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm21627Q810R0 219 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist3h2aQ8BFU2 130 aaKnown RBP9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 C130079G13RikQ8BUY2 280 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 P2ry10bQ8BY68 352 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2afQ8CGP5 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2ahQ8CGP6 128 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist1h2akQ8CGP7 130 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Slc16a14Q8K1C7 512 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 RfesdQ8K2P6 157 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Rtn4ip1Q924D0 396 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Mrm1Q99J25 320 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Rnf128Q9D304 428 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Chp2Q9D869 196 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Lgi1Q9JIA1 557 aa9.06□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Igkv16-104A0A0B4J1I1 116 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm44973A0A140LJJ1 189 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gm13420A0A140LJJ2 248 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr727A2RTN7 324 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Wscd2D4PHA7 571 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gpr31F8VQN3 319 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Zmat3O54836 290 aaKnown RBP9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 F10O88947 481 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 P01675 107 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 P01676 107 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 P01677 107 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 P01678 107 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gpr52P0C5J4 361 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 NelfeP19426 375 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hsd3b2P26149 373 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Gja4P28235 333 aa9.05□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Sult2a8Q8BGL3 282 aa9.05□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms