RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Cd209fD3Z1H5 274 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Zfp945E9PYM8 794 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Zfp108E9Q8I5 642 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm11397F6V5V4 377 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm10340K7N708 205 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Psmc3ipO35047 217 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Socs2O35717 198 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Stk16O88697 305 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Hipk1O88904 1210 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 F10O88947 481 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 RetP35546 1115 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 ThrbP37242 461 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Alox12eP55249 662 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Has2P70312 552 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Plpp5Q3UMZ3 260 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Acsm3Q3UNX5 580 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Zmat1Q3V0C1 714 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Zrsr1Q64707 428 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Kng2Q6S9I3 644 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Serpinb9fQ80UK5 377 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 SargQ8BI29 606 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 PgghgQ8BP56 690 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Fignl1Q8BPY9 683 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tmco6Q8BQX5 494 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Crispld2Q8BZQ2 495 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Vps9d1Q8C190 649 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Fam221aQ8C790 301 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm5111Q8C9M4 190 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Rln3Q8CHK2 141 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tmem125Q8CHQ6 216 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Cnot3Q8K0V4 751 aaKnown RBP13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 DctdQ8K2D6 178 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Fam110aQ8R184 296 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Vmn1r30Q8R2D2 302 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Cbr4Q91VT4 236 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gpx4Q91XR9 253 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Pcdhac1Q91Y10 964 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Cd209eQ91ZW7 208 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Slc29a3Q99P65 475 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Snx20Q9D2Y5 313 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Idh3aQ9D6R2 366 aaKnown RBP13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Entpd4Q9DBT4 613 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Atp6v1c1Q9Z1G3 382 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Lrit3W8DXL4 681 aa13.39□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Spag17Q5S003 2320 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm20518E9Q548 580 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr574F8VQ18 346 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm10479K7N6H4 105 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 En1P09065 401 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Cnr1P47746 473 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Kcnj12P52187 427 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Bmp8bP55105 399 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gcnt2P97402 401 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 BmxP97504 651 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Prelid2Q0VBB0 177 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Dcp1bQ3U564 578 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm45902Q3UDN3 361 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm10750Q3V0I0 133 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr1308Q7TQX0 320 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Cst13Q80ZN5 141 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Slc36a3Q811P0 477 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ckap4Q8BMK4 575 aaKnown RBP13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Vmn1r6Q8R2D4 303 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr791Q8VGJ0 312 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Serpinb9gQ8VHQ1 377 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 OptcQ920A0 328 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Q99K99 313 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 PglsQ9CQ60 257 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Chchd3Q9CRB9 227 aaKnown RBP13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Chaf1bQ9D0N7 572 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Shisa5Q9D7I0 235 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tmem43Q9DBS1 400 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Tmem25Q9DCF1 365 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Mrps34Q9JIK9 218 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Psma4Q9R1P0 261 aa13.38□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Olfr396-ps1A0A0U1RNF5 211 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 A0A1Y7VIU7 259 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Zfp735B1ARH2 734 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Spata6lB2RV46 347 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gm8267E9Q207 261 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Vmn1r184E9Q2N4 314 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Vmn2r117K7N6V1 857 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 HpnO35453 436 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Clk1P22518 483 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Vipr2P41588 437 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ccr4P51680 360 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Ccng1P51945 294 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Smad5P97454 465 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Mbd6Q3TY92 1003 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 MagixQ4KL35 324 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Il18r1Q61098 537 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 SordQ64442 357 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Krt72Q6IME9 520 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Zfp975Q6NVD6 525 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Alg8Q6P8H8 526 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Klhl6Q6V595 619 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Znf786Q8BV42 777 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 QdprQ8BVI4 241 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Gabarapl1Q8R3R8 117 aa13.37□□□□□ -0.27
Ercc1-201ENSMUST00000003645 Akr1d1Q8VCX1 325 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 76.7 ms