RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 PLBD1Q6P4A8 553 aa15.79■□□□□ 0.12
PHGDH-208ENST00000641023 MISPQ8IVT2 679 aa15.79■□□□□ 0.12
PHGDH-208ENST00000641023 C8orf44Q96CB5 159 aa15.79■□□□□ 0.12
PHGDH-208ENST00000641023 TMCO6Q96DC7 493 aa15.79■□□□□ 0.12
PHGDH-208ENST00000641023 DEPDC7Q96QD5 511 aa15.79■□□□□ 0.12
PHGDH-208ENST00000641023 SLC24A3Q9HC58 644 aa15.79■□□□□ 0.12
PHGDH-208ENST00000641023 EXOSC1Q9Y3B2 195 aaKnown RBP15.79■□□□□ 0.12
PHGDH-208ENST00000641023 FAM183AA6NL82 134 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 SCG5P05408 212 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 ZNF3P17036 446 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 NAGAP17050 411 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 HK1P19367 917 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 PAICSP22234 425 aaKnown RBP15.78■□□□□ 0.12
PHGDH-208ENST00000641023 TACR3P29371 465 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 FHL1Q13642 323 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 CBFBQ13951 182 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 TIMM50Q3ZCQ8 353 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 ARHGAP11AQ6P4F7 1023 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 AMER2Q8N7J2 671 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 OR5W2Q8NH69 310 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 RPL3LQ92901 407 aaKnown RBP15.78■□□□□ 0.12
PHGDH-208ENST00000641023 NACC2Q96BF6 587 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 ADAM19Q9H013 955 aa15.78■□□□□ 0.12
PHGDH-208ENST00000641023 IGKV1D-42A0A075B6H8 117 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 PRR23D1E9PI22 279 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-208ENST00000641023 WWP2O00308 870 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 SCO2O43819 266 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 OR7A10O76100 309 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 PPP1R3DO95685 299 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 IFNGP01579 166 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 PRR23D2P0DMB1 279 aaPredicted RBP15.77■□□□□ 0.12
PHGDH-208ENST00000641023 MST1P26927 711 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 P2RX1P51575 399 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 PRPS1P60891 318 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 NCS1P62166 190 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 TSTQ16762 297 aaKnown RBP15.77■□□□□ 0.12
PHGDH-208ENST00000641023 BBS1Q8NFJ9 593 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 TAPBPLQ9BX59 468 aa15.77■□□□□ 0.12
PHGDH-208ENST00000641023 TMEM129A0AVI4 362 aa15.77■□□□□ 0.11
PHGDH-208ENST00000641023 GMFGO60234 142 aa15.77■□□□□ 0.11
PHGDH-208ENST00000641023 CDC40O60508 579 aaKnown RBP eCLIP15.77■□□□□ 0.11
PHGDH-208ENST00000641023 GADD45AP24522 165 aa15.77■□□□□ 0.11
PHGDH-208ENST00000641023 ETV5P41161 510 aa15.77■□□□□ 0.11
PHGDH-208ENST00000641023 ETV1P50549 477 aa15.77■□□□□ 0.11
PHGDH-208ENST00000641023 DCAF12Q5T6F0 453 aa15.77■□□□□ 0.11
PHGDH-208ENST00000641023 ZNF517Q6ZMY9 492 aaPredicted RBP15.77■□□□□ 0.11
PHGDH-208ENST00000641023 C16orf47Q6ZP98 133 aaPredicted RBP15.77■□□□□ 0.11
PHGDH-208ENST00000641023 MEPCEQ7L2J0 689 aaKnown RBP15.77■□□□□ 0.11
PHGDH-208ENST00000641023 LRRC17Q8N6Y2 441 aa15.77■□□□□ 0.11
PHGDH-208ENST00000641023 NDNFQ8TB73 568 aa15.77■□□□□ 0.11
PHGDH-208ENST00000641023 ZHX1-C8orf76Q96EF9 292 aa15.77■□□□□ 0.11
PHGDH-208ENST00000641023 EXOGQ9Y2C4 368 aaKnown RBP15.77■□□□□ 0.11
PHGDH-208ENST00000641023 LRRN3E7EW58 273 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 APOL3O95236 402 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 CDK4P11802 303 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 CXCR1P25024 350 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 TMED10P49755 219 aaKnown RBP15.76■□□□□ 0.11
PHGDH-208ENST00000641023 WNT4P56705 351 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 RAB15P59190 212 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.76■□□□□ 0.11
PHGDH-208ENST00000641023 MLLT11Q13015 90 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-208ENST00000641023 DGUOKQ16854 277 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 ARMC4Q5T2S8 1044 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 NUP54Q7Z3B4 507 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 PSD4Q8NDX1 1056 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 OR5M3Q8NGP4 307 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 DUSP19Q8WTR2 217 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 LIPHQ8WWY8 451 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 PMEPA1Q969W9 287 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 OPALINQ96PE5 141 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 ERMAPQ96PL5 475 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-208ENST00000641023 STRADBQ9C0K7 418 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 NANSQ9NR45 359 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 MYOTQ9UBF9 498 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 PTRH2Q9Y3E5 179 aaKnown RBP15.76■□□□□ 0.11
PHGDH-208ENST00000641023 WDFY3Q8IZQ1 3526 aa15.76■□□□□ 0.11
PHGDH-208ENST00000641023 LOC102723996A0A087X1L8 192 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 TMEM200CA6NKL6 621 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 SLC22A31A6NKX4 558 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 SOCS6O14544 535 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 CDX4O14627 284 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-208ENST00000641023 CLPXO76031 633 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 RPL4P36578 427 aaKnown RBP15.75■□□□□ 0.11
PHGDH-208ENST00000641023 FBXW4P57775 412 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 TUBA1BP68363 451 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 ITGADQ13349 1161 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 TMED1Q13445 227 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 ZNF74Q16587 644 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 NIPAL3Q6P499 406 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 C19orf48Q6RUI8 117 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 PAQR6Q6TCH4 344 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 FAM198BQ6UWH4 519 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 DPY19L2P2Q6ZN68 376 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 TUBA1AQ71U36 451 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 C10orf53Q8N6V4 93 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 SLC37A3Q8NCC5 494 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 OR9Q1Q8NGQ5 310 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 B4GALNT2Q8NHY0 566 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 TBC1D15Q8TC07 691 aa15.75■□□□□ 0.11
PHGDH-208ENST00000641023 PTP4A1Q93096 173 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms