RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 C3orf36Q3SXR2 165 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 TSPO2Q5TGU0 170 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 BCL6BQ8N143 479 aaPredicted RBP9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 TMCO5AQ8N6Q1 288 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 RFWD2Q8NHY2 731 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 RHEBL1Q8TAI7 183 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 GPR119Q8TDV5 335 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 CDKL2Q92772 493 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 POP5Q969H6 163 aaKnown RBP9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 MS4A7Q9GZW8 240 aaPredicted RBP9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 MIEF1Q9NQG6 463 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 SLC9A8Q9Y2E8 581 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 PCNX3Q9H6A9 2034 aa9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 HEATR1Q9H583 2144 aaKnown RBP9.44□□□□□ -0.9
PTP4A1-207ENST00000639568 NKX2-2O95096 273 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 CRABP2P29373 138 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 CCR4P51679 360 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 SLC16A1P53985 500 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 PRKAG1P54619 331 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 ARL4CP56559 192 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 DLG1Q12959 904 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 DAG1Q14118 895 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 QPRTQ15274 297 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 FAM83EQ2M2I3 478 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 TBRG1Q3YBR2 411 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 TIGD2Q4W5G0 525 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 SYT14P1Q58G82 188 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 AVPI1Q5T686 147 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 SZRD1Q7Z422 152 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 ZAR1Q86SH2 424 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 ADGRG3Q86Y34 549 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 WDFY1Q8IWB7 410 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 CDRT4Q8N9R6 151 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 CDC26Q8NHZ8 85 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 C16orf78Q8WTQ4 265 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 JADE3Q92613 823 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 RAB8BQ92930 207 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 YIPF5Q969M3 257 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 ZNF48Q96MX3 618 aaPredicted RBP9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 RBBP8Q99708 897 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 CPNE1Q99829 537 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 SLC30A2Q9BRI3 323 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 CPSF2Q9P2I0 782 aaKnown RBP9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 GRID1Q9ULK0 1009 aa9.43□□□□□ -0.9
PTP4A1-207ENST00000639568 CLPSL1A2RUU4 121 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 SEC14L2O76054 403 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 HSPA4LO95757 839 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 GPANK1O95872 356 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 DDCP20711 480 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 ATP6V1C1P21283 382 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 TYK2P29597 1187 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 EVX1P49640 407 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 RNF144AP50876 292 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 LCN2P80188 198 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 SNTB2Q13425 540 aaKnown RBP9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 CBFBQ13951 182 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 C2orf68Q2NKX9 166 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 TUSC1Q2TAM9 212 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 SLC25A53Q5H9E4 307 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 KRT80Q6KB66 452 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 LRIG3Q6UXM1 1119 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 CCDC103Q8IW40 242 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 COX18Q8N8Q8 333 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 POMGNT2Q8NAT1 580 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 FBXO36Q8NEA4 188 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 OR5W2Q8NH69 310 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 SLC25A43Q8WUT9 341 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 BOD1Q96IK1 185 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 QRSL1Q9H0R6 528 aaKnown RBP9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 GLIPR2Q9H4G4 154 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 TCF7L1Q9HCS4 588 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 CRNNQ9UBG3 495 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 SPIN1Q9Y657 262 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 BIRC6Q9NR09 4857 aa9.42□□□□□ -0.9
PTP4A1-207ENST00000639568 A0A096LPK6 155 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 CCDC189A1A4V9 331 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 CCDC151A5D8V7 595 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 FAM181BA6NEQ2 426 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 OIP5O43482 229 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 CDC14BO60729 498 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 DEAF1O75398 565 aaPredicted RBP9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 NGFP01138 241 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 IGLV1-44P01699 117 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 IGHV2-5P01817 119 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 SELEP16581 610 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 TIA1P31483 386 aaKnown RBP eCLIP9.41□□□□□ -0.97e-10■■□□□ 11.4
PTP4A1-207ENST00000639568 GPC1P35052 558 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 SPRP35270 261 aaPredicted RBP9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 ALDH3B1P43353 468 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 TUBA1BP68363 451 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 TUBA4AP68366 448 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 ACSM2AQ08AH3 577 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 C2orf80Q0P641 193 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 MERTKQ12866 999 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 TRAF3Q13114 568 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 PDCD1Q15116 288 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 GGTA1PQ4G0N0 100 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 CCNJQ5T5M9 372 aa9.41□□□□□ -0.9
PTP4A1-207ENST00000639568 KPRPQ5T749 579 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms