RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PRSS51A0A1B0GVH4 220 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 OR6C68A6NDL8 312 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 XRCC3O43542 346 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 CYC1P08574 325 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 FUT4P22083 530 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 DCAF12Q5T6F0 453 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SFXN4Q6P4A7 337 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 KCNRGQ8N5I3 272 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 C12orf29Q8N999 325 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 TMEM178AQ8NBL3 297 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 H1FXQ92522 213 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 DOHHQ9BU89 302 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SLC2A9Q9NRM0 540 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 RNF150Q9ULK6 438 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 OR1A2Q9Y585 309 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ANKRD36A6QL64 1941 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF609O15014 1411 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 OOEPA6NGQ2 149 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SLC38A8A6NNN8 435 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 CNTN5O94779 1100 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 GGT1P19440 569 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 FPR1P21462 350 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 DPP4P27487 766 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 FKBP1AP62942 108 aaKnown RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 HIST2H3AQ71DI3 136 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 GRASPQ7Z6J2 395 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-212ENST00000636194 CPNE8Q86YQ8 564 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 PLPP6Q8IY26 295 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF519Q8TB69 540 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 HSH2DQ96JZ2 352 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 PIP5K1AQ99755 562 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 MACROD1Q9BQ69 325 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SFXN1Q9H9B4 322 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 UBTD1Q9HAC8 227 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 FLVCR2Q9UPI3 526 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 LAMP3Q9UQV4 416 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 POLDIP2Q9Y2S7 368 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 TMEM98Q9Y2Y6 226 aa5.67□□□□□ -1.5
SCN1A-212ENST00000636194 SPATA31A3Q5VYP0 1347 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SMLR1H3BR10 107 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 AQP7O14520 342 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 GAPDHSO14556 408 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 BMP1P13497 986 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 NMBRP28336 390 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ADRA1BP35368 520 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SRP14P37108 136 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ABHD18Q0P651 414 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ELAVL3Q14576 367 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TBC1D28Q2M2D7 210 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 OR10K2Q6IF99 312 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ETFRF1Q6IPR1 90 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TMEM65Q6PI78 240 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 OR10AD1Q8NGE0 317 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 OR52B6Q8NGF0 335 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 OR8J3Q8NGG0 315 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 WDR92Q96MX6 357 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ABCG5Q9H222 651 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 RNF19AQ9NV58 838 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ING1Q9UK53 422 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PTPRQQ9UMZ3 2332 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 C1orf226A1L170 272 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF716A6NP11 495 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 K7ERQ8 282 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 DDAH2O95865 285 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 RETP07949 1114 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 DBHP09172 617 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 OR4E1P0C645 316 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TACR1P25103 407 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TSEN54Q7Z6J9 526 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 NRARPQ7Z6K4 114 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CLNKQ7Z7G1 428 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 MRPL10Q7Z7H8 261 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 COMMD7Q86VX2 200 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SH3RF2Q8TEC5 729 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 FER1L6-AS2Q96M78 137 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SMOQ99835 787 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TGIF2Q9GZN2 237 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ATP13A2Q9NQ11 1180 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 FCF1Q9Y324 198 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 M0R2Z0 102 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PCDH17O14917 1159 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 OR4F21O95013 312 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SPDEFO95238 335 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SNAP29O95721 258 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 HLA-AP01891 365 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 THBS1P07996 1170 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SFTPDP35247 375 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 BMPR1AP36894 532 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CLCNKBP51801 687 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 IL10RAQ13651 578 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CEBPEQ15744 281 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TCTN1Q2MV58 587 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF547Q8IVP9 402 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ZADH2Q8N4Q0 377 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SGMS2Q8NHU3 365 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ART4Q93070 314 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TIMP4Q99727 224 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ISCA1Q9BUE6 129 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CRB3Q9BUF7 120 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms