RNA–Protein interactions for RNA: ENST00000625063.3

ATRX-219, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-219ENST00000625063 MS4A12Q9NXJ0 267 aa4.84□□□□□ -1.63
ATRX-219ENST00000625063 NPAP1Q9NZP6 1156 aa4.84□□□□□ -1.63
ATRX-219ENST00000625063 KLHL13Q9P2N7 655 aa4.84□□□□□ -1.63
ATRX-219ENST00000625063 GIMAP2Q9UG22 337 aa4.84□□□□□ -1.63
ATRX-219ENST00000625063 ZNF490Q9ULM2 529 aaPredicted RBP4.84□□□□□ -1.63
ATRX-219ENST00000625063 USP22Q9UPT9 525 aa4.84□□□□□ -1.63
ATRX-219ENST00000625063 SNX5Q9Y5X3 404 aa4.84□□□□□ -1.63
ATRX-219ENST00000625063 C17orf51A8MQB3 221 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 B4DXG7 233 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 AP3B1O00203 1094 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 CLGNO14967 610 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 PHGDHO43175 533 aaKnown RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 CXCL13O43927 109 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 LYZL6O75951 148 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 WDR47O94967 919 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 SYNGR4O95473 234 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 STAMBPO95630 424 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 BCL10O95999 233 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 SLC35E2BP0CK96 405 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 SLC35E2P0CK97 266 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 AGTR1P30556 359 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 SLC7A1P30825 629 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 SLC1A2P43004 574 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 UBA52P62987 128 aaKnown RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 TIAL1Q01085 375 aaKnown RBP eCLIP4.83□□□□□ -1.64
ATRX-219ENST00000625063 TNFRSF17Q02223 184 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 SPOCK1Q08629 439 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 ITGADQ13349 1161 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 DHX34Q14147 1143 aaKnown RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 SLMAPQ14BN4 828 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 ZSWIM7Q19AV6 140 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 FAM209BQ5JX69 171 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 C11orf63Q6NUN7 778 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 ZNF544Q6NX49 715 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 PGBD2Q6P3X8 592 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 UGT2A3Q6UWM9 527 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 TFAP2EQ6VUC0 442 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 RBM43Q6ZSC3 357 aaKnown RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 NUFIP2Q7Z417 695 aaKnown RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 GPR180Q86V85 440 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 SPATA6LQ8N4H0 392 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 GBP7Q8N8V2 638 aaPredicted RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 Q8N9P0 234 aaPredicted RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 OR52B6Q8NGF0 335 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 LRTOMTQ8WZ04 291 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 FBXO17Q96EF6 278 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 ZNF48Q96MX3 618 aaPredicted RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 COL21A1Q96P44 957 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 NDNQ99608 321 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 SLC6A7Q99884 636 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 SORBS1Q9BX66 1292 aaKnown RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 ITPAQ9BY32 194 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 DDX47Q9H0S4 455 aaKnown RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 NHEJ1Q9H9Q4 299 aaPredicted RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 CXorf21Q9HAI6 301 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 MYOZ1Q9NP98 299 aaPredicted RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 DDX28Q9NUL7 540 aaKnown RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 HIF1ANQ9NWT6 349 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 NSMCE4AQ9NXX6 385 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 TAS2R13Q9NYV9 303 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 MED11Q9P086 117 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 ASIC3Q9UHC3 531 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 BCAP29Q9UHQ4 241 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 MCTS1Q9ULC4 181 aaKnown RBP4.83□□□□□ -1.64
ATRX-219ENST00000625063 TMCC3Q9ULS5 477 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 MGAT4BQ9UQ53 548 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 PPIAL4AQ9Y536 164 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 AP4B1Q9Y6B7 739 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 BIRC6Q9NR09 4857 aa4.83□□□□□ -1.64
ATRX-219ENST00000625063 GOLGA8QA0A0J9YX86 632 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 GOLGA8OA6NCC3 632 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 A6NLC8 198 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 B4DSR2 109 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 B9A039 149 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 F5H0A9 414 aaPredicted RBP4.82□□□□□ -1.64
ATRX-219ENST00000625063 GOLGA8NF8WBI6 632 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 GOLGA8RI6L899 631 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 ACOX3O15254 700 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 PIN1P1O15428 100 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 SCELO95171 688 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 CLDN9O95484 217 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 OPN1LWP04000 364 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 TACSTD2P09758 323 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 NUDT17P0C025 328 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 ZSCAN5DPP0CG00 497 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 TPSB2P20231 275 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 NT5EP21589 574 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 ZNF83P51522 516 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 PGGT1BP53609 377 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 CLNS1AP54105 237 aaKnown RBP4.82□□□□□ -1.64
ATRX-219ENST00000625063 CDKN2DP55273 166 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 HNRNPH2P55795 449 aaKnown RBP4.82□□□□□ -1.64
ATRX-219ENST00000625063 UBASH3AP57075 661 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 BASP1P80723 227 aaKnown RBP4.82□□□□□ -1.64
ATRX-219ENST00000625063 CCNIQ14094 377 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 CNN3Q15417 329 aaKnown RBP4.82□□□□□ -1.64
ATRX-219ENST00000625063 TPSAB1Q15661 275 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 HIST2H2ACQ16777 129 aaPredicted RBP4.82□□□□□ -1.64
ATRX-219ENST00000625063 PPP1R3AQ16821 1122 aa4.82□□□□□ -1.64
ATRX-219ENST00000625063 C18orf21Q32NC0 220 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms