RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 UFD1Q92890 307 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 ARSGQ96EG1 525 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CTRCQ99895 268 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 ZPBPQ9BS86 351 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CRB3Q9BUF7 120 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 ADAM19Q9H013 955 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 HINT3Q9NQE9 182 aaKnown RBP14.97□□□□□ -0.01
LDB3-208ENST00000623007 SSR3Q9UNL2 185 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CARD8Q9Y2G2 431 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CAB39Q9Y376 341 aaPredicted RBP14.97□□□□□ -0.01
LDB3-208ENST00000623007 NPFFR2Q9Y5X5 522 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CLDN25C9JDP6 229 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 ADAM11O75078 769 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 ZFAND5O76080 213 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 IGHEP01854 428 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 TSPAN19P0C672 248 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 EVI2BP34910 448 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 CCR4P51679 360 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 LIMK1P53667 647 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 FXYD6P3P58550 94 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 NCS1P62166 190 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 TPBGQ13641 420 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 COL9A2Q14055 689 aaPredicted RBP14.96□□□□□ -0.01
LDB3-208ENST00000623007 CD226Q15762 336 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 EMC4Q5J8M3 183 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 MRPL14Q6P1L8 145 aaKnown RBP14.96□□□□□ -0.01
LDB3-208ENST00000623007 PAPD4Q6PIY7 484 aaKnown RBP14.96□□□□□ -0.01
LDB3-208ENST00000623007 MEX3DQ86XN8 651 aaKnown RBP14.96□□□□□ -0.01
LDB3-208ENST00000623007 EGFL6Q8IUX8 553 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 ACBD7Q8N6N7 88 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 OR51A7Q8NH64 312 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 CMKLR1Q99788 373 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 COL25A1Q9BXS0 654 aaPredicted RBP14.96□□□□□ -0.01
LDB3-208ENST00000623007 MCCC2Q9HCC0 563 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 FSCN3Q9NQT6 498 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 SDHAF3Q9NRP4 125 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 RXFP3Q9NSD7 469 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 B3GNT3Q9Y2A9 372 aa14.96□□□□□ -0.01
LDB3-208ENST00000623007 PATE3B3GLJ2 98 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 HCRTR2O43614 444 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 MT-ATP6P00846 226 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 INHBBP09529 407 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 GP1BBP13224 206 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 RPS4XP62701 263 aaKnown RBP14.95□□□□□ -0.02
LDB3-208ENST00000623007 C17orf67Q0P5P2 114 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 IL10RAQ13651 578 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 ZNF404Q494X3 552 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 SLC35D3Q5M8T2 416 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 PLBD1Q6P4A8 553 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 TUBA3EQ6PEY2 450 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 LANCL3Q6ZV70 420 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 ATCAYQ86WG3 371 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 GPALPP1Q8IXQ4 340 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 BMPERQ8N8U9 685 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 POMGNT2Q8NAT1 580 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 SLC38A9Q8NBW4 561 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 APCDD1LQ8NCL9 501 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 NDNFQ8TB73 568 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 SLC22A8Q8TCC7 542 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 TNFRSF13CQ96RJ3 184 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 ARHGAP9Q9BRR9 750 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 FKRPQ9H9S5 495 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 NANSQ9NR45 359 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 ZNF229Q9UJW7 825 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 HIF3AQ9Y2N7 669 aa14.95□□□□□ -0.02
LDB3-208ENST00000623007 RFPL3O75679 317 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 SLC25A12O75746 678 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 HIST1H2ABP04908 130 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 GAAP10253 952 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 CD53P19397 219 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 CXCR1P25024 350 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 MSX1P28360 303 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 TAS2R43P59537 309 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 ITGADQ13349 1161 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 HIST3H2AQ7L7L0 130 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 BCDIN3DQ7Z5W3 292 aaKnown RBP14.94□□□□□ -0.02
LDB3-208ENST00000623007 OR6S1Q8NH40 331 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 HIST1H2ACQ93077 130 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 SPSB2Q99619 263 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 STRADBQ9C0K7 418 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 CHRNA9Q9UGM1 479 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 GSTK1Q9Y2Q3 226 aa14.94□□□□□ -0.02
LDB3-208ENST00000623007 TRAV27A0A087WT01 109 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 LOC102723996A0A087X1L8 192 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 SLC30A4O14863 429 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 FADS1O60427 444 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 TIAF1O95411 115 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 NTN1O95631 604 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 NR4A1P22736 598 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 S100A5P33763 92 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 RPL4P36578 427 aaKnown RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 ETV5P41161 510 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 ETV1P50549 477 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 POLR2HP52434 150 aaKnown RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 EFNA3P52797 238 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 LSM3P62310 102 aaKnown RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 E2F1Q01094 437 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 ZNF117Q03924 483 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 TRAM1Q15629 374 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 EXT1Q16394 746 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms