RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SPIN3Q5JUX0 258 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 GRINAQ7Z429 371 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 CAMKMTQ7Z624 323 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC35F3Q8IY50 421 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 CCDC36Q8IYA8 594 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 OR8H1Q8NGG4 311 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 TSLPQ969D9 159 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF566Q969W8 418 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC30A2Q9BRI3 323 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 DUSP15Q9H1R2 295 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 INPP5EQ9NRR6 644 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 MED11Q9P086 117 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 C14orf166Q9Y224 244 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 NOSIPQ9Y314 301 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 PARP14Q460N5 1801 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 PRAMEF33A0A0G2JMD5 474 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 OR2A25A4D2G3 310 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 J3KTA2 159 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 DLGAP1O14490 977 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 TNFSF14O43557 240 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 PRKYO43930 277 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 PRAMEF10O60809 474 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 RLN2P04090 185 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF35P13682 527 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 P2RX1P51575 399 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 GABREP78334 506 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 CDK5R2Q13319 367 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 DNASE1L3Q13609 305 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC6A19Q695T7 634 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 BAIAP2L2Q6UXY1 529 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 MEX3DQ86XN8 651 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ADGRF3Q8IZF5 1079 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 DEFB124Q8NES8 71 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 OR13C2Q8NGS9 318 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 TMEM163Q8TC26 289 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 MMP27Q9H306 513 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ANKRD10Q9NXR5 420 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 PFDN2Q9UHV9 154 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 SIPA1L1O43166 1804 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 DOCK3Q8IZD9 2030 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 LOC285556D6RIA3 1793 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 CD8B2A6NJW9 211 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 RAD1O60671 282 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 UCHL1P09936 223 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 CD8BP10966 210 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 TNFSF4P23510 183 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 HBMQ6B0K9 141 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 DHRS13Q6UX07 377 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC43A2Q8N370 569 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 SAMD12Q8N8I0 201 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC41A2Q96JW4 573 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 OR2A14Q96R47 310 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 NUDT22Q9BRQ3 303 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 MED17Q9NVC6 651 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 SCP2D1Q9UJQ7 156 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 A0A0X1KG70 313 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 EPOPA6NHQ4 379 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 LRRTM2O43300 516 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ADAM23O75077 832 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ATP6V1G1O75348 118 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 IFNA21P01568 189 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 TPOP07202 933 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 THBS1P07996 1170 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 CHRM4P08173 479 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 BCKDHBP21953 392 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 PRPH2P23942 346 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 CLDN17P56750 224 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 BTG2P78543 158 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 IL10RAQ13651 578 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 C4orf46Q504U0 113 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 C22orf42Q6IC83 251 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF836Q6ZNA1 936 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 MEPCEQ7L2J0 689 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 PTRH1Q86Y79 214 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ASB17Q8WXJ9 295 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 FAM46BQ96A09 425 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 PPP1R14BQ96C90 147 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 TMEM121BQ9BXQ6 578 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 ATG5Q9H1Y0 275 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 GMEB1Q9Y692 573 aa8.74□□□□□ -1.01
CLTCL1-208ENST00000615606 A0A1W2PPK0 400 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 ANKRD30BLA7E2S9 258 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 PPM1DO15297 605 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 CHP2O43745 196 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 STK17BO94768 372 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 PAPLNO95428 1278 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 F13BP05160 661 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 PSKH1P11801 424 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 HOXB9P17482 250 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 LCN1P31025 176 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 APOBEC1P41238 236 aaKnown RBP8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 GIPRP48546 466 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 RAB2AP61019 212 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 SCRN3Q0VDG4 424 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 RUNX2Q13950 521 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 ARL6IP1Q15041 203 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 RSU1Q15404 277 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 RAB11BQ15907 218 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 PLAG1Q6DJT9 500 aa8.73□□□□□ -1.01
CLTCL1-208ENST00000615606 BOLLQ8N9W6 283 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms