RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 PHC2Q8IXK0 858 aa13.1□□□□□ -0.31
CTSA-216ENST00000607212 ZNF75CPQ92670 426 aaPredicted RBP13.1□□□□□ -0.31
CTSA-216ENST00000607212 BEX2Q9BXY8 128 aa13.1□□□□□ -0.31
CTSA-216ENST00000607212 MANSC1Q9H8J5 431 aa13.1□□□□□ -0.31
CTSA-216ENST00000607212 CTPS2Q9NRF8 586 aa13.1□□□□□ -0.31
CTSA-216ENST00000607212 TAS2R16Q9NYV7 291 aa13.1□□□□□ -0.31
CTSA-216ENST00000607212 CHRNA9Q9UGM1 479 aa13.1□□□□□ -0.31
CTSA-216ENST00000607212 ZDHHC2Q9UIJ5 367 aa13.1□□□□□ -0.31
CTSA-216ENST00000607212 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
CTSA-216ENST00000607212 WDR45Q9Y484 360 aa13.1□□□□□ -0.31
CTSA-216ENST00000607212 PGM3O95394 542 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 AGR2O95994 175 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 SERPINB5P36952 375 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 PDCD2Q16342 344 aaPredicted RBP13.09□□□□□ -0.31
CTSA-216ENST00000607212 TMEM249Q2WGJ8 235 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 C6orf52Q5T4I8 152 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 ANKRD46Q86W74 232 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 ARFGAP2Q8N6H7 521 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 ZNF525Q8N782 197 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 TCP10LQ8TDR4 215 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 FAM168AQ92567 244 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 RAB8BQ92930 207 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 TNFRSF13CQ96RJ3 184 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 DPY30Q9C005 99 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 GRIP2Q9C0E4 1043 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 OR11A1Q9GZK7 315 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 ZNF350Q9GZX5 532 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 SERHL2Q9H4I8 314 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 FKRPQ9H9S5 495 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 MKS1Q9NXB0 559 aa13.09□□□□□ -0.31
CTSA-216ENST00000607212 NOP53Q9NZM5 478 aaKnown RBP13.09□□□□□ -0.31
CTSA-216ENST00000607212 PHF1O43189 567 aaPredicted RBP13.08□□□□□ -0.32
CTSA-216ENST00000607212 SLC25A16P16260 332 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 KHKP50053 298 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 CLDN8P56748 225 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 CHRNB3Q05901 458 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 PDK3Q15120 406 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 CARTPTQ16568 116 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 OR7E24Q6IFN5 339 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 KLHL24Q6TFL4 600 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 DNM1P46Q6ZS02 220 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 GRINAQ7Z429 371 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 CCDC103Q8IW40 242 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 RIBC1Q8N443 379 aaPredicted RBP13.08□□□□□ -0.32
CTSA-216ENST00000607212 VPS37AQ8NEZ2 397 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 OR52E4Q8NGH9 312 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 ARL5BQ96KC2 179 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 NAA11Q9BSU3 229 aaPredicted RBP13.08□□□□□ -0.32
CTSA-216ENST00000607212 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.08□□□□□ -0.32
CTSA-216ENST00000607212 KCNE5Q9UJ90 142 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 CDC42EP3Q9UKI2 254 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 HDGFL3Q9Y3E1 203 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 SLC25A15Q9Y619 301 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 PMF1-BGLAPU3KQ54 211 aa13.08□□□□□ -0.32
CTSA-216ENST00000607212 FBN3Q75N90 2809 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 IGKV3D-15A0A087WSY6 115 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 ETV2O00321 342 aaPredicted RBP13.07□□□□□ -0.32
CTSA-216ENST00000607212 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
CTSA-216ENST00000607212 KIAA0513O60268 411 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 PMS2P2O95744 297 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 FAM157CP0CG43 387 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 ZNF16P17020 682 aaPredicted RBP13.07□□□□□ -0.32
CTSA-216ENST00000607212 CDH2P19022 906 aaPredicted RBP13.07□□□□□ -0.32
CTSA-216ENST00000607212 UQCRC2P22695 453 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 PGM1P36871 562 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 IDH2P48735 452 aaKnown RBP13.07□□□□□ -0.32
CTSA-216ENST00000607212 EMX2Q04743 252 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 MAPK14Q16539 360 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 CYB5R2Q6BCY4 276 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 B3GLCTQ6Y288 498 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 RIMKLAQ8IXN7 391 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 NANOS1Q8WY41 292 aaKnown RBP13.07□□□□□ -0.32
CTSA-216ENST00000607212 ROPN1LQ96C74 230 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 DDIT4LQ96D03 193 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 KCNS3Q9BQ31 491 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 INPP5KQ9BT40 448 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 CCDC106Q9BWC9 280 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 AMBRA1Q9C0C7 1298 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 SHARPINQ9H0F6 387 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 COL6A5A8TX70 2615 aa13.07□□□□□ -0.32
CTSA-216ENST00000607212 TMED7-TICAM2A0A0A6YYA0 188 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 WDR91A4D1P6 747 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 ZNF716A6NP11 495 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 KRT33AO76009 404 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 HTR3AP46098 478 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 SLC35A1P78382 337 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 TGFBR3Q03167 851 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 GGTLC2Q14390 218 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 GABRA6Q16445 453 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 ANXA8L1Q5VT79 327 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 TYW3Q6IPR3 259 aaKnown RBP13.06□□□□□ -0.32
CTSA-216ENST00000607212 C11orf71Q6IPW1 123 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 ZNF544Q6NX49 715 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 NUDCD3Q8IVD9 361 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 EIF1ADQ8N9N8 165 aaKnown RBP13.06□□□□□ -0.32
CTSA-216ENST00000607212 OR10H5Q8NGA6 315 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 FBXO17Q96EF6 278 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 CHODLQ9H9P2 273 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 POLE3Q9NRF9 147 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 PARPBPQ9NWS1 579 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms