RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 TGIF1Q15583 401 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 TIGD6Q17RP2 521 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 ZNF829Q3KNS6 432 aaPredicted RBP12.08□□□□□ -0.48
VRK3-205ENST00000593919 FCRLBQ6BAA4 426 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 IGF2-ASQ6U949 168 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 WDR88Q6ZMY6 472 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 SLC15A4Q8N697 577 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 TMCO5AQ8N6Q1 288 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 LSMEM1Q8N8F7 131 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 GRHL3Q8TE85 626 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 TMEM255BQ8WV15 326 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 FAM210AQ96ND0 272 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 PRSS27Q9BQR3 290 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 TMEM27Q9HBJ8 222 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 TBC1D23Q9NUY8 699 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 TAS2R16Q9NYV7 291 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 CPAMD8Q8IZJ3 1885 aa12.08□□□□□ -0.48
VRK3-205ENST00000593919 LAMA5O15230 3695 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 A0A1B0GWA3 101 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 M0R082 166 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 MPZL2O60487 215 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 LYPD3O95274 346 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ADORA3P0DMS8 318 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 NAGAP17050 411 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 CCR4P51679 360 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ZNF117Q03924 483 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ZNF613Q6PF04 617 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ZNF730Q6ZMV8 503 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ZNF440Q8IYI8 595 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 CADM2Q8N3J6 435 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 B4GALNT2Q8NHY0 566 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ADAMTS17Q8TE56 1095 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ACOT11Q8WXI4 607 aaPredicted RBP12.07□□□□□ -0.48
VRK3-205ENST00000593919 HGDQ93099 445 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 SH3YL1Q96HL8 342 aaPredicted RBP12.07□□□□□ -0.48
VRK3-205ENST00000593919 TRIM2Q9C040 744 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 EXOSC3Q9NQT5 275 aaKnown RBP12.07□□□□□ -0.48
VRK3-205ENST00000593919 SPTBN4Q9H254 2564 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ADAM10O14672 748 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 HCRTR2O43614 444 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 PTHP01270 115 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 FBXO45P0C2W1 286 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ICAM2P13598 275 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 OPRL1P41146 370 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 SOX3P41225 446 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ATP1A4Q13733 1029 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 SLX4IPQ5VYV7 408 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 C16orf87Q6PH81 154 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ZER1Q7Z7L7 766 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 ADCK1Q86TW2 530 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 RAB43Q86YS6 212 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 LINC00471Q8N535 108 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 IQCF1Q8N6M8 205 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 TOR1AIP2Q8NFQ8 470 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 TMCO6Q96DC7 493 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 SPACA9Q96E40 222 aaPredicted RBP12.07□□□□□ -0.48
VRK3-205ENST00000593919 KLHDC3Q9BQ90 382 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 DNAJC27Q9NZQ0 273 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 CORINQ9Y5Q5 1042 aa12.07□□□□□ -0.48
VRK3-205ENST00000593919 SH3D21A4FU49 640 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 EFCAB10A6NFE3 127 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 EFCAB9A8MZ26 197 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 CHP2O43745 196 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 GMFGO60234 142 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 ENTPD6O75354 484 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 DXOO77932 396 aaKnown RBP12.06□□□□□ -0.48
VRK3-205ENST00000593919 COPZ1P61923 177 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 NTRK2Q16620 822 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 ALG10BQ5I7T1 473 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 BICRALQ6AI39 1079 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 RRM2BQ7LG56 351 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 MEX3DQ86XN8 651 aaKnown RBP12.06□□□□□ -0.48
VRK3-205ENST00000593919 OR10G3Q8NGC4 313 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 TTC9Q92623 222 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 LGALS12Q96DT0 336 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 PLEKHA8Q96JA3 519 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 GPA33Q99795 319 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 LAT2Q9GZY6 243 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 CDCP1Q9H5V8 836 aa12.06□□□□□ -0.48
VRK3-205ENST00000593919 MAGEB3O15480 346 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 PIP5K1CO60331 668 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 TP53P04637 393 aaPredicted RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 ADRA2AP08913 450 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 HSMCR30P0CW71 290 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 GADD45AP24522 165 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 CLK1P49759 484 aaKnown RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 DGUOKQ16854 277 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 RSPO4Q2I0M5 234 aaPredicted RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 C12orf73Q69YU5 71 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 C1orf94Q6P1W5 598 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 CASP12Q6UXS9 341 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 NUP54Q7Z3B4 507 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 RPS19BP1Q86WX3 136 aaKnown RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 NRMQ8IXM6 262 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 FNDC8Q8TC99 324 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 DYNC2LI1Q8TCX1 351 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 RNF138Q8WVD3 245 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 GALNT9Q9HCQ5 603 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 CNIH4Q9P003 139 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 RPS6KB2Q9UBS0 482 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms