RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 RIMS4Q9H426 269 aaPredicted RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 ACTL8Q9H568 366 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 DMAP1Q9NPF5 467 aaPredicted RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 IL37Q9NZH6 218 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 SATB2Q9UPW6 733 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 RNF24Q9Y225 148 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 PIGLQ9Y2B2 252 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 SH3GLB1Q9Y371 365 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 SELENOKQ9Y6D0 94 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CSNK1G3Q9Y6M4 447 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 EP300Q09472 2414 aaPredicted RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CEP250Q9BV73 2442 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 TECTAO75443 2155 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 FRYQ5TBA9 3013 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 A0A087X0K7 114 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 TRBV4-1A0A0J9YWV2 114 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 GSTTP1A0A1W2PQM5 241 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 GOLGA6L4A6NEF3 574 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 PPIAL4DF5H284 164 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CCL24O00175 119 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 PDXKO00764 312 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ABCD4O14678 606 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ARPC3O15145 178 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 BCAS1O75363 584 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CCNB2O95067 398 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ZSCAN5DPP0CG00 497 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 TCN1P20061 433 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 HNF1AP20823 631 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 TUBG1P23258 451 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 IL32P24001 234 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 PIK3R1P27986 724 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 LCN1P31025 176 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 HOXA9P31269 272 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 PRKAR2BP31323 418 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 OTX1P32242 354 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 IST1P53990 364 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 NAPAP54920 295 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CNTN2Q02246 1040 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 RCAN2Q14206 197 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 PON2Q15165 354 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ACKR1Q16570 336 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 TMEM53Q6P2H8 277 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 NIPAL3Q6P499 406 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CBLN3Q6UW01 205 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CD164L2Q6UWJ8 174 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 IL17RELQ6ZVW7 336 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 NDUFAF7Q7L592 441 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ANKRD46Q86W74 232 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CCDC50Q8IVM0 306 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF440Q8IYI8 595 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 GPR65Q8IYL9 337 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 RCOR2Q8IZ40 523 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 FAM89BQ8N5H3 189 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 SMYD1Q8NB12 490 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 SIDT2Q8NBJ9 832 aaKnown RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 KIAA0895Q8NCT3 520 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 OR5D13Q8NGL4 314 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 OR4C15Q8NGM1 316 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 OR4A16Q8NH70 328 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 PNPT1Q8TCS8 783 aaKnown RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 MRGPRFQ96AM1 343 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 NSMCE3Q96MG7 304 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ACCSQ96QU6 501 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 RASL10BQ96S79 203 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CDCA3Q99618 268 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CCM2Q9BSQ5 444 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CABLES2Q9BTV7 478 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 IDI2Q9BXS1 227 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ROPN1BQ9BZX4 212 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 GAL3ST2Q9H3Q3 398 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 SAV1Q9H4B6 383 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 NTN4Q9HB63 628 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 CSNK1G1Q9HCP0 422 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 MRPL47Q9HD33 250 aaKnown RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 MRPS30Q9NP92 439 aaKnown RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 TUBG2Q9NRH3 451 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 GPR173Q9NS66 373 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 TEX10Q9NXF1 929 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 EURLQ9NYK6 297 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF510Q9Y2H8 683 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 PUS1Q9Y606 427 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMAD4-216ENST00000593223 FRMPD4Q14CM0 1322 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 MAST2Q6P0Q8 1798 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 ARID2Q68CP9 1835 aa4.14□□□□□ -1.75
SMAD4-216ENST00000593223 NBEAQ8NFP9 2946 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 GOLGA8QA0A0J9YX86 632 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 A8MXQ7 604 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 CENPBD1B2RD01 187 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 C2CD4DB7Z1M9 353 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 H0YIG0 161 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 HAS3O00219 553 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 PDHXO00330 501 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 EEF2KO00418 725 aaKnown RBP4.13□□□□□ -1.75
SMAD4-216ENST00000593223 UPK3AO75631 287 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 KRT33AO76009 404 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 ERLIN2O94905 339 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 BAG3O95817 575 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 CRYGBP07316 175 aa4.13□□□□□ -1.75
SMAD4-216ENST00000593223 ANXA4P09525 319 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-216ENST00000593223 PPP1R2P41236 205 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms