RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 MRTO4Q9UKD2 239 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-209ENST00000589838 C17orf105B2RV13 164 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 J3QLW9 94 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 HPGDSO60760 199 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 IGF2P01344 180 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 MRPL3P09001 348 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 PNMTP11086 282 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 HPGDP15428 266 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 ZNF19P17023 458 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 RFX2P48378 723 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 NNATQ16517 81 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 ISXQ2M1V0 245 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.59■□□□□ 0.417e-7■■□□□ 13
PRKCSH-209ENST00000589838 CNIH2Q6PI25 160 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 ARL9Q6T311 187 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 SPATC1Q76KD6 591 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 UBQLNLQ8IYU4 475 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 MS4A15Q8N5U1 240 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 METTL27Q8N6F8 245 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 KCTD12Q96CX2 325 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 SLC46A1Q96NT5 459 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 UBQLN4Q9NRR5 601 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 IER3IP1Q9Y5U9 82 aa17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 SIRT4Q9Y6E7 314 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-209ENST00000589838 OR7A10O76100 309 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 OR2T7P0C7T2 308 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 IL9P15248 144 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 MYL9P24844 172 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 RPL4P36578 427 aaKnown RBP17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 PPICP45877 212 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 PRPS1P60891 318 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 ACTA2P62736 377 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 ACTG2P63267 376 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 DAB2P98082 770 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 ZNF85Q03923 595 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 RIN1Q13671 783 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 DEFB133Q30KQ1 61 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 WBP2NLQ6ICG8 309 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 C19orf18Q8NEA5 215 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 OR2T27Q8NH04 317 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 MVB12AQ96EY5 273 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 SENP5Q96HI0 755 aaPredicted RBP17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 C4orf36Q96KX1 117 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 OR1F2PQ96R84 312 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 RNF32Q9H0A6 362 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 ERVMER34-1Q9H9K5 563 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 CUTCQ9NTM9 273 aa17.58■□□□□ 0.41
PRKCSH-209ENST00000589838 OR2W5A6NFC9 320 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 ARPC3O15145 178 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 SSX4O60224 188 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 CLPSP04118 112 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 CLUP10909 449 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 MAOBP27338 520 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 RORAP35398 523 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 RPS5P46782 204 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 ARL4DP49703 201 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 NRG3P56975 720 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 NXPH1P58417 271 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 GGTLC2Q14390 218 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 UBXN2BQ14CS0 331 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 TAB1Q15750 504 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 CARTPTQ16568 116 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 SLC35D3Q5M8T2 416 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 TRIQKQ629K1 86 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 HBMQ6B0K9 141 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 PAMR1Q6UXH9 720 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 EGFL6Q8IUX8 553 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 FAM71CQ8NEG0 241 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 C3orf49Q96BT1 292 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 DEPDC7Q96QD5 511 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 YIPF2Q9BWQ6 316 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 PPP1R3EQ9H7J1 279 aa17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 EXOSC3Q9NQT5 275 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 TMEM184BQ9Y519 407 aaPredicted RBP17.58■□□□□ 0.4
PRKCSH-209ENST00000589838 SHISA3A0PJX4 238 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 ELOA3DA6NLF2 546 aaPredicted RBP17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 SCDO00767 359 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 GNB5O14775 395 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 NCR1O76036 304 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 IL33O95760 270 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 SERPINA3P01011 423 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 SLC2A2P11168 524 aaPredicted RBP17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 HIST1H1CP16403 213 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 RPL6Q02878 288 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 INSL4Q14641 139 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 PON3Q15166 354 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 ELOA3BQ3SY89 546 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 FAAH2Q6GMR7 532 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 SYS1Q8N2H4 156 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 ELOA3Q8NG57 546 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 OR4K13Q8NH42 304 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 ABHD4Q8TB40 342 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 NEDD4LQ96PU5 975 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 CNN2Q99439 309 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 ENAMQ9NRM1 1142 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 PNO1Q9NRX1 252 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 LANCL2Q9NS86 450 aa17.57■□□□□ 0.4
PRKCSH-209ENST00000589838 CCNKO75909 580 aa17.56■□□□□ 0.4
PRKCSH-209ENST00000589838 OR2B3O76000 313 aa17.56■□□□□ 0.4
PRKCSH-209ENST00000589838 LCN1P31025 176 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms