RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SKP2Q13309 424 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 BHLHB9Q6PI77 547 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 OR5D16Q8NGK9 328 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 OR5AK3PQ8NH89 298 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 SFXN5Q8TD22 340 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 OR5P2Q8WZ92 322 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 MOAP1Q96BY2 351 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 FOXN4Q96NZ1 517 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 OR7D2Q96RA2 312 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 PRPF18Q99633 342 aaKnown RBP13.34□□□□□ -0.27
ACTN4-211ENST00000589528 NMUR2Q9GZQ4 415 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 SLC17A5Q9NRA2 495 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 ACER3Q9NUN7 267 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 GPATCH2Q9NW75 528 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 PARPBPQ9NWS1 579 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 CHRNA9Q9UGM1 479 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 ATP6V1HQ9UI12 483 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 DCTN4Q9UJW0 460 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 MOKQ9UQ07 419 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■□□□ 12.3
ACTN4-211ENST00000589528 IGHV4-61A0A0C4DH41 118 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 ZNF716A6NP11 495 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 URI1O94763 535 aaPredicted RBP13.33□□□□□ -0.28
ACTN4-211ENST00000589528 C6orf47O95873 294 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 PROCP04070 461 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 LAMP1P11279 417 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 CPA3P15088 417 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 ZNF23P17027 643 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 ECHS1P30084 290 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 CCT5P48643 541 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 FOXG1P55316 489 aaPredicted RBP13.33□□□□□ -0.28
ACTN4-211ENST00000589528 OR2B6P58173 313 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 PRPS1P60891 318 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 TRMT10CQ7L0Y3 403 aaKnown RBP13.33□□□□□ -0.28
ACTN4-211ENST00000589528 EIF3MQ7L2H7 374 aaKnown RBP13.33□□□□□ -0.28
ACTN4-211ENST00000589528 CCDC103Q8IW40 242 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 NATD1Q8N6N6 113 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 WDR31Q8NA23 367 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 C1orf162Q8NEQ5 155 aaPredicted RBP13.33□□□□□ -0.28
ACTN4-211ENST00000589528 SDF2Q99470 211 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 CTPS2Q9NRF8 586 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 OXSMQ9NWU1 459 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 HDGFL3Q9Y3E1 203 aa13.33□□□□□ -0.28
ACTN4-211ENST00000589528 DUXAA6NLW8 204 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 RIPK2O43353 540 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 PLIN3O60664 434 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 STX11O75558 287 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 AK1P00568 194 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 CDH2P19022 906 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-211ENST00000589528 FKBP2P26885 142 aaKnown RBP13.32□□□□□ -0.28
ACTN4-211ENST00000589528 RYKP34925 604 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 ZNF141Q15928 474 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 SWI5Q1ZZU3 235 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 C16orf62Q7Z3J2 963 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 SPATA19Q7Z5L4 167 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 HOMEZQ8IX15 550 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 C17orf53Q8N3J3 647 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-211ENST00000589528 ANKS4BQ8N8V4 417 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 PSMA8Q8TAA3 256 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 ARL5BQ96KC2 179 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 BPESC1Q9GZL8 116 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 TUBB1Q9H4B7 451 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 MKLN1Q9UL63 735 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 SLC9A8Q9Y2E8 581 aa13.32□□□□□ -0.28
ACTN4-211ENST00000589528 A0A1W2PPM1 405 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 DNPH1O43598 174 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 ERCC1P07992 297 aaPredicted RBP13.31□□□□□ -0.28
ACTN4-211ENST00000589528 ITGA2P17301 1181 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 CCNA2P20248 432 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 MATN1P21941 496 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 SLC16A1P53985 500 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 RPS26P62854 115 aaKnown RBP13.31□□□□□ -0.28
ACTN4-211ENST00000589528 WHAMMP3Q1A5X7 153 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 C1QTNF12Q5T7M4 302 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 KANK2Q63ZY3 851 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 RNF165Q6ZSG1 346 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 GRINAQ7Z429 371 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 TWIST2Q8WVJ9 160 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 C1orf159Q96HA4 380 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 PPP3R2Q96LZ3 170 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 NAA11Q9BSU3 229 aaPredicted RBP13.31□□□□□ -0.28
ACTN4-211ENST00000589528 CCDC106Q9BWC9 280 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 ADAM19Q9H013 955 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 SLC7A10Q9NS82 523 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 EXD2Q9NVH0 621 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 MID2Q9UJV3 735 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 SLC35A3Q9Y2D2 325 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 DNAJC15Q9Y5T4 150 aa13.31□□□□□ -0.28
ACTN4-211ENST00000589528 SPRY1O43609 319 aaPredicted RBP13.3□□□□□ -0.28
ACTN4-211ENST00000589528 EIF1BO60739 113 aaKnown RBP13.3□□□□□ -0.28
ACTN4-211ENST00000589528 DNAJA2O60884 412 aa13.3□□□□□ -0.28
ACTN4-211ENST00000589528 PEX11AO75192 247 aa13.3□□□□□ -0.28
ACTN4-211ENST00000589528 KRT33AO76009 404 aa13.3□□□□□ -0.28
ACTN4-211ENST00000589528 SNUPNO95149 360 aaKnown RBP13.3□□□□□ -0.28
ACTN4-211ENST00000589528 MPGP29372 298 aa13.3□□□□□ -0.28
ACTN4-211ENST00000589528 NTF4P34130 210 aa13.3□□□□□ -0.28
ACTN4-211ENST00000589528 SERPINF1P36955 418 aa13.3□□□□□ -0.28
ACTN4-211ENST00000589528 CLK1P49759 484 aaKnown RBP13.3□□□□□ -0.28
ACTN4-211ENST00000589528 SLC25A3Q00325 362 aa13.3□□□□□ -0.28
ACTN4-211ENST00000589528 MST1LQ2TV78 715 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms