RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ANKRD19PQ9H560 264 aa10.98□□□□□ -0.65
DNMT1-218ENST00000589294 DENND2DQ9H6A0 471 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-218ENST00000589294 NMNAT1Q9HAN9 279 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-218ENST00000589294 ARMC1Q9NVT9 282 aa10.98□□□□□ -0.65
DNMT1-218ENST00000589294 AURKCQ9UQB9 309 aa10.98□□□□□ -0.65
DNMT1-218ENST00000589294 LIPGQ9Y5X9 500 aa10.98□□□□□ -0.65
DNMT1-218ENST00000589294 SPENQ96T58 3664 aaKnown RBP10.97□□□□□ -0.65
DNMT1-218ENST00000589294 A0A1W2PRQ8 180 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 HTR3EA5X5Y0 456 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 A8MVM7 634 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 hCG_2039718K7EN88 272 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 ADAMDEC1O15204 470 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 PRSS23O95084 383 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 LYPD3O95274 346 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 WISP1O95388 367 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 THY1P04216 161 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 ZNF708P17019 499 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 POU3F2P20265 443 aaPredicted RBP10.97□□□□□ -0.65
DNMT1-218ENST00000589294 IL11P20809 199 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 TCEA1P23193 301 aaKnown RBP10.97□□□□□ -0.65
DNMT1-218ENST00000589294 RBM34P42696 430 aaKnown RBP10.97□□□□□ -0.65
DNMT1-218ENST00000589294 YAP1P46937 504 aaKnown RBP10.97□□□□□ -0.65
DNMT1-218ENST00000589294 HMGA2P52926 109 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 RBPJQ06330 500 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 CRYZQ08257 329 aaKnown RBP10.97□□□□□ -0.65
DNMT1-218ENST00000589294 DGCR6Q14129 220 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 SF3B4Q15427 424 aaKnown RBP eCLIP10.97□□□□□ -0.659e-6■■■■■ 27.7
DNMT1-218ENST00000589294 TMEM176BQ3YBM2 270 aaPredicted RBP10.97□□□□□ -0.65
DNMT1-218ENST00000589294 ZFP1Q6P2D0 407 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 ESPNLQ6ZVH7 1005 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 ZNF771Q7L3S4 317 aaPredicted RBP10.97□□□□□ -0.65
DNMT1-218ENST00000589294 CHERPQ8IWX8 916 aaKnown RBP10.97□□□□□ -0.65
DNMT1-218ENST00000589294 MEIOBQ8N635 442 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 PIK3C3Q8NEB9 887 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 SLCO4A1Q96BD0 722 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 DDIT4LQ96D03 193 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 DHRS1Q96LJ7 313 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 TMEM43Q9BTV4 400 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 SLC19A3Q9BZV2 496 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 PRDM14Q9GZV8 571 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 SPRR3Q9UBC9 169 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 SLC7A7Q9UM01 511 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 HDGFL3Q9Y3E1 203 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 AP4S1Q9Y587 144 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 NCKAP5O14513 1909 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 FREM3P0C091 2139 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 ZNF407Q9C0G0 2248 aa10.97□□□□□ -0.65
DNMT1-218ENST00000589294 TMEM72A0PK05 275 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 AHRRA9YTQ3 701 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 ANKRD65E5RJM6 399 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 H3BML4 177 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 J3KTA2 159 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 HNRNPRO43390 633 aaKnown RBP10.96□□□□□ -0.65
DNMT1-218ENST00000589294 NPIPB7O75200 414 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 FKBP6O75344 327 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 H1F0P07305 194 aaKnown RBP10.96□□□□□ -0.65
DNMT1-218ENST00000589294 HOXD4P09016 255 aaPredicted RBP10.96□□□□□ -0.65
DNMT1-218ENST00000589294 STARP49675 285 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 CLDN18P56856 261 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 GK3PQ14409 553 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 GXYLT1Q4G148 440 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 SYT14P1Q58G82 188 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 PDSS1Q5T2R2 415 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 WLSQ5T9L3 541 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 TTC33Q6PID6 262 aaPredicted RBP10.96□□□□□ -0.65
DNMT1-218ENST00000589294 POMZP3Q6PJE2 187 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 FGD2Q7Z6J4 655 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 ZNF605Q86T29 641 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 RNF113BQ8IZP6 322 aaKnown RBP10.96□□□□□ -0.65
DNMT1-218ENST00000589294 RNF217Q8TC41 542 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 WDYHV1Q96HA8 205 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 PRSS27Q9BQR3 290 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 ZNF426Q9BUY5 554 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 TIGARQ9NQ88 270 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 PAQR5Q9NXK6 330 aaPredicted RBP10.96□□□□□ -0.65
DNMT1-218ENST00000589294 TRAPPC4Q9Y296 219 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 ZNF835Q9Y2P0 537 aa10.96□□□□□ -0.65
DNMT1-218ENST00000589294 DNAJC13O75165 2243 aa10.96□□□□□ -0.66
DNMT1-218ENST00000589294 NPIPA2E9PIF3 369 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 NPIPA3F8WFD2 350 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 OR2T1O43869 369 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 GADD45GO95257 159 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 CST1P01037 141 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 IGF2P01344 180 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 TFPIP10646 304 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 FCGR1AP12314 374 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 CCNA2P20248 432 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 PTGER4P35408 488 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 CLDN15P56746 228 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 CLDN20P56880 219 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 CARD18P57730 90 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 RPS3AP61247 264 aaKnown RBP10.95□□□□□ -0.66
DNMT1-218ENST00000589294 HSF1Q00613 529 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 OR2T5Q6IEZ7 315 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 Q6ZPB1 254 aaPredicted RBP10.95□□□□□ -0.66
DNMT1-218ENST00000589294 TMPPEQ6ZT21 453 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 CHMP1BQ7LBR1 199 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 GGNQ86UU5 652 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 NKAIN4Q8IVV8 208 aa10.95□□□□□ -0.66
DNMT1-218ENST00000589294 GALNT11Q8NCW6 608 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms