RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 BTNL2Q9UIR0 455 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 SPIN1Q9Y657 262 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-205ENST00000587774 ALPK2Q86TB3 2170 aa16.61■□□□□ 0.25
TRIM47-205ENST00000587774 IGKV3D-15A0A087WSY6 115 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 ZNF716A6NP11 495 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 SOD3P08294 240 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 DANCRP0C864 163 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 IL12AP29459 219 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 APOBEC1P41238 236 aaKnown RBP16.6■□□□□ 0.25
TRIM47-205ENST00000587774 CDKN2CP42773 168 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 KCNJ10P78508 379 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 SYPL1Q16563 259 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 ZNF672Q499Z4 452 aaPredicted RBP16.6■□□□□ 0.25
TRIM47-205ENST00000587774 GRINAQ7Z429 371 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 GALNT5Q7Z7M9 940 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 ANKFN1Q8N957 763 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 PANX1Q96RD7 426 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 INPP5KQ9BT40 448 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 OR11A1Q9GZK7 315 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 SLC38A1Q9H2H9 487 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 RAB21Q9UL25 225 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 MAGED1Q9Y5V3 778 aaPredicted RBP16.6■□□□□ 0.25
TRIM47-205ENST00000587774 RTTNQ86VV8 2226 aa16.6■□□□□ 0.25
TRIM47-205ENST00000587774 DPRXA6NFQ7 191 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 CCDC154A6NI56 674 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 OVOL3O00110 214 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 AP3D1O14617 1153 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 PMS2P2O95744 297 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 IGHV3-9P01782 118 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 CHRM4P08173 479 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 PPA1Q15181 289 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 MTDHQ86UE4 582 aaKnown RBP16.59■□□□□ 0.25
TRIM47-205ENST00000587774 ZNF100Q8IYN0 542 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 ARFGAP2Q8N6H7 521 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 ANKRD42Q8N9B4 389 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 CNOT9Q92600 299 aaKnown RBP16.59■□□□□ 0.25
TRIM47-205ENST00000587774 TRIM2Q9C040 744 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.59■□□□□ 0.25
TRIM47-205ENST00000587774 NPAP1Q9NZP6 1156 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 EMC3Q9P0I2 261 aa16.59■□□□□ 0.25
TRIM47-205ENST00000587774 PGRP06401 933 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 GGT1P19440 569 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 PCSK6P29122 969 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 EPHA3P29320 983 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 IDH2P48735 452 aaKnown RBP16.58■□□□□ 0.24
TRIM47-205ENST00000587774 TIMM23BQ5SRD1 257 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 HHATQ5VTY9 493 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 ADGRG3Q86Y34 549 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 TRIML2Q8N7C3 387 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 PNPT1Q8TCS8 783 aaKnown RBP16.58■□□□□ 0.24
TRIM47-205ENST00000587774 SMAP2Q8WU79 429 aaPredicted RBP16.58■□□□□ 0.24
TRIM47-205ENST00000587774 ZHX1-C8orf76Q96EF9 292 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 TRNT1Q96Q11 434 aaKnown RBP16.58■□□□□ 0.24
TRIM47-205ENST00000587774 OR52E6Q96RD3 313 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 WDR55Q9H6Y2 383 aaPredicted RBP16.58■□□□□ 0.24
TRIM47-205ENST00000587774 NOSIPQ9Y314 301 aaKnown RBP16.58■□□□□ 0.24
TRIM47-205ENST00000587774 HDGFL3Q9Y3E1 203 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 GPR45Q9Y5Y3 372 aa16.58■□□□□ 0.24
TRIM47-205ENST00000587774 GOLGA8QA0A0J9YX86 632 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 A0A1W2PP18 115 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 GOLGA8OA6NCC3 632 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 AGAP5A6NIR3 686 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 GOLGA8NF8WBI6 632 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 DNPH1O43598 174 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 RAMP1O60894 148 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 RAD51DO75771 328 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 GSNP06396 782 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 CCNA2P20248 432 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 RPS4Y1P22090 263 aaKnown RBP16.57■□□□□ 0.24
TRIM47-205ENST00000587774 CDKN1AP38936 164 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 WDR4P57081 412 aaKnown RBP16.57■□□□□ 0.24
TRIM47-205ENST00000587774 TNK1Q13470 666 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 PDK3Q15120 406 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 PGGHGQ32M88 737 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 COX20Q5RI15 118 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 FBXW9Q5XUX1 488 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 DNAJC14Q6Y2X3 702 aaPredicted RBP16.57■□□□□ 0.24
TRIM47-205ENST00000587774 SPATA19Q7Z5L4 167 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 ZNF433Q8N7K0 673 aaPredicted RBP16.57■□□□□ 0.24
TRIM47-205ENST00000587774 PIGXQ8TBF5 258 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 WDR60Q8WVS4 1066 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 APH1AQ96BI3 265 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 LIPT1Q9Y234 373 aa16.57■□□□□ 0.24
TRIM47-205ENST00000587774 TMED7-TICAM2A0A0A6YYA0 188 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 TMEM120BA0PK00 339 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 OR5H1A6NKK0 313 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 INAFM1C9JVW0 142 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 HDAC3O15379 428 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 PGM3O95394 542 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 NTF4P34130 210 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 SLC16A1P53985 500 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 FAPQ12884 760 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 VEZF1Q14119 521 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 CLEC12BQ2HXU8 276 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 LRRC74BQ6ZQY2 392 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 ZNF621Q6ZSS3 439 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 CCDC103Q8IW40 242 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 CMIPQ8IY22 773 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 UBE2J2Q8N2K1 259 aa16.56■□□□□ 0.24
TRIM47-205ENST00000587774 MGARPQ8TDB4 240 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms