RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 ZNF716A6NP11 495 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 ABCD4O14678 606 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 ANKRD28O15084 1053 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 ADAM11O75078 769 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 RAD51DO75771 328 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 PGM3O95394 542 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 CPSF4O95639 269 aaKnown RBP12.35□□□□□ -0.43
ATG4D-206ENST00000586863 TFPIP10646 304 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 PTNP21246 168 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 NTF4P34130 210 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 RYKP34925 604 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 CSNK2A1P68400 391 aaPredicted RBP12.35□□□□□ -0.43
ATG4D-206ENST00000586863 SPOCK1Q08629 439 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 CHI3L2Q15782 390 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 SAXO2Q658L1 398 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 MTDHQ86UE4 582 aaKnown RBP12.35□□□□□ -0.43
ATG4D-206ENST00000586863 DTX2Q86UW9 622 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 XAGE5Q8WWM1 108 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 ROPN1LQ96C74 230 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 ZG16BQ96DA0 208 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 DPY30Q9C005 99 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 OR11A1Q9GZK7 315 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 EMC3Q9P0I2 261 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 CHRNA9Q9UGM1 479 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 SLC35A3Q9Y2D2 325 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 GOLGA8QA0A0J9YX86 632 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 PRSS51A0A1B0GVH4 220 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 GOLGA8OA6NCC3 632 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 GOLGA8NF8WBI6 632 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 TM9SF1O15321 606 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 SERPINE1P05121 402 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 GUSBP08236 651 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 UQCRC2P22695 453 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 APOBEC1P41238 236 aaKnown RBP12.34□□□□□ -0.43
ATG4D-206ENST00000586863 ABCE1P61221 599 aaKnown RBP12.34□□□□□ -0.43
ATG4D-206ENST00000586863 PDK3Q15120 406 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 SPANXN4Q5MJ08 99 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 ATAD3BQ5T9A4 648 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 FBXW9Q5XUX1 488 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 OR52N5Q8NH56 324 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 ZNF563Q8TA94 476 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 OIT3Q8WWZ8 545 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 APH1AQ96BI3 265 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 NEURL3Q96EH8 262 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 SORT1Q99523 831 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 SAP130Q9H0E3 1048 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 ALG2Q9H553 416 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 POLE3Q9NRF9 147 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 ZNF446Q9NWS9 450 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 PCDHGB4Q9UN71 923 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 NOSIPQ9Y314 301 aaKnown RBP12.34□□□□□ -0.43
ATG4D-206ENST00000586863 SPIN1Q9Y657 262 aaPredicted RBP12.34□□□□□ -0.43
ATG4D-206ENST00000586863 MALRD1Q5VYJ5 2156 aa12.34□□□□□ -0.43
ATG4D-206ENST00000586863 A0A1W2PR80 420 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 E7EQL1 145 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 PMS2P2O95744 297 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 AGR2O95994 175 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 KHKP50053 298 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 SLC16A1P53985 500 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 FOXG1P55316 489 aaPredicted RBP12.33□□□□□ -0.44
ATG4D-206ENST00000586863 CHRNEQ04844 493 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 ANXA8L1Q5VT79 327 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 AP1ARQ63HQ0 302 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 B3GLCTQ6Y288 498 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 CXXC5Q7LFL8 322 aaKnown RBP12.33□□□□□ -0.44
ATG4D-206ENST00000586863 P2RY8Q86VZ1 359 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 ADGRG3Q86Y34 549 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 CCDC103Q8IW40 242 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 UBE2J2Q8N2K1 259 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
ATG4D-206ENST00000586863 CNOT9Q92600 299 aaKnown RBP12.33□□□□□ -0.44
ATG4D-206ENST00000586863 TESCQ96BS2 214 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 HS6ST2Q96MM7 605 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 SLC35A5Q9BS91 424 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 NUF2Q9BZD4 464 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 GRIP2Q9C0E4 1043 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 TMBIM4Q9HC24 238 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 EXOSC3Q9NQT5 275 aaKnown RBP12.33□□□□□ -0.44
ATG4D-206ENST00000586863 FAIMQ9NVQ4 179 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 MARCOQ9UEW3 520 aaPredicted RBP12.33□□□□□ -0.44
ATG4D-206ENST00000586863 B3GALT5Q9Y2C3 310 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 HDGFL3Q9Y3E1 203 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 RAP2CQ9Y3L5 183 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 SLC25A15Q9Y619 301 aa12.33□□□□□ -0.44
ATG4D-206ENST00000586863 HMGN4O00479 90 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 AP3D1O14617 1153 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 ITGA5P08648 1049 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 CCNA2P20248 432 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 CHI3L1P36222 383 aaPredicted RBP12.32□□□□□ -0.44
ATG4D-206ENST00000586863 ZNF83P51522 516 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 IRX1P78414 480 aaPredicted RBP12.32□□□□□ -0.44
ATG4D-206ENST00000586863 KCNJ10P78508 379 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 FAM174BQ3ZCQ3 159 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 GPAT3Q53EU6 434 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 TNFAIP8L3Q5GJ75 292 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 HHATQ5VTY9 493 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 C11orf71Q6IPW1 123 aa12.32□□□□□ -0.44
ATG4D-206ENST00000586863 SSX8Q7RTT4 187 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms