RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 CT62P0C5K7 136 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SNRPBP14678 240 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GIFP27352 417 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 KIAA1024LP59773 190 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PPP2CBP62714 309 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PPP2CAP67775 309 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 DGCR2P98153 550 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PRRT3Q5FWE3 981 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZBTB37Q5TC79 503 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RD3Q7Z3Z2 195 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CTHRC1Q96CG8 243 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR51J1Q9H342 316 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 EVA1AQ9H8M9 152 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CLEC4AQ9UMR7 237 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SPACA6W5XKT8 324 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 KIAA0100Q14667 2235 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ADAM11O75078 769 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ARL6IP5O75915 188 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TFP02787 698 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 IFI6P09912 130 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ANXA3P12429 323 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 POLR2CP19387 275 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RBM34P42696 430 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 HCCSP53701 268 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GAS6Q14393 721 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CDK5R1Q15078 307 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TP53I3Q53FA7 332 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SYT9Q86SS6 491 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SYS1Q8N2H4 156 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 FAM109AQ8N4B1 249 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF431Q8TF32 576 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ADAMTS14Q8WXS8 1223 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PELI1Q96FA3 418 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZFP3Q96NJ6 502 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PTCHD1Q96NR3 888 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZFYVE21Q9BQ24 234 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CACNG6Q9BXT2 260 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TEKT2Q9UIF3 430 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF222Q9UK12 451 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MGAT4AQ9UM21 535 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 DNAH14Q0VDD8 3507 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 A0A0B4J203 849 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 A0A1W2PPK0 400 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 A6NCN8 305 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 H0YGG7 62 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 K7EQS6 105 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 FLRT2O43155 660 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NOS1APO75052 506 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR2T7P0C7T2 308 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ACTR1BP42025 376 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ACAA2P42765 397 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GDI2P50395 445 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RAG2P55895 527 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ACTR1AP61163 376 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ARF3P61204 181 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ACTA2P62736 377 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ACTG2P63267 376 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 HSD17B12Q53GQ0 312 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GRAMD2AQ8IUY3 354 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ARL14Q8N4G2 192 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR5T3Q8NGG3 340 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR52E2Q8NGJ4 325 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR2T27Q8NH04 317 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 HOXB13Q92826 284 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZMYND19Q96E35 227 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LRFN5Q96NI6 719 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TTTY10Q9BZA0 68 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 BRD7Q9NPI1 651 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 B3GNT2Q9NY97 397 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ACTR10Q9NZ32 417 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PTTG3PQ9NZH4 202 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CHRNA9Q9UGM1 479 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CAMK2AQ9UQM7 478 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MRPS7Q9Y2R9 242 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 UNC80Q8N2C7 3258 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LRRN3E7EW58 273 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MAGEB4O15481 346 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 B3GALNT1O75752 331 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NKX2-2O95096 273 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 UCHL1P09936 223 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CXCL3P19876 107 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PER3P56645 1201 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RPS11P62280 158 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SIRPAP78324 504 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 HTRA3P83110 453 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TIGD4Q8IY51 512 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 POMGNT2Q8NAT1 580 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR8H1Q8NGG4 311 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR10G6Q8NH81 332 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 HERVK_113Q902F9 699 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RSC1A1Q92681 617 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TSACCQ96A04 125 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RERGQ96A58 199 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ERMAPQ96PL5 475 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MYADMQ96S97 322 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 C7orf50Q9BRJ6 194 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LRRN3Q9H3W5 708 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SPATA2Q9UM82 520 aa13.07□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TRANK1O15050 2925 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GSTZ1O43708 216 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms