RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SMCO4Q9NRQ5 59 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 GMEB2Q9UKD1 530 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 OR2A25A4D2G3 310 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 TMEM212A6NML5 194 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 GYPBP06028 91 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 JUNDP17535 347 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 RAB4AP20338 218 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 POLR2IP36954 125 aaKnown RBP12.21□□□□□ -0.46
RNF43-208ENST00000584437 SCGB2A2Q13296 93 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 C18orf63Q68DL7 685 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 PLXDC1Q8IUK5 500 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 SCARB1Q8WTV0 552 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 RBM24Q9BX46 236 aaKnown RBP12.21□□□□□ -0.46
RNF43-208ENST00000584437 CPEB1Q9BZB8 566 aaKnown RBP12.21□□□□□ -0.46
RNF43-208ENST00000584437 EHFQ9NZC4 300 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 ETV7Q9Y603 341 aa12.21□□□□□ -0.46
RNF43-208ENST00000584437 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 TRAV27A0A087WT01 109 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 TRBV4-1A0A0J9YWV2 114 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 TRDV1A0A1B0GX56 115 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 D6RAR5 112 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 SMIM18P0DKX4 95 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 AOAHP28039 575 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 HOXA9P31269 272 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 ADRA1AP35348 466 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 TNK1Q13470 666 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 Q6ZPB1 254 aaPredicted RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 DPPA4Q7L190 304 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 ISL2Q96A47 359 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 SENP5Q96HI0 755 aaPredicted RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 GCM1Q9NP62 436 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 ACKR4Q9NPB9 350 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 B4DXG7 233 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 J3KTA2 159 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 SULT1B1O43704 296 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 STK17BO94768 372 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 P04436 131 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 EFNA3P52797 238 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 NXNL2Q5VZ03 156 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 WBP2NLQ6ICG8 309 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 MRPL10Q7Z7H8 261 aaKnown RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 TMEM200AQ86VY9 491 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 MEX3DQ86XN8 651 aaKnown RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 PNPLA1Q8N8W4 532 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 ZNF582Q96NG8 517 aaPredicted RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 C1orf123Q9NWV4 160 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 MOKQ9UQ07 419 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 ANKRD34BA5PLL1 514 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 C1QBP02746 253 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 CCR7P32248 378 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 MFGE8Q08431 387 aaPredicted RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 OXA1LQ15070 435 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 SYPL1Q16563 259 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 RTP2Q5QGT7 225 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 GPR155Q7Z3F1 870 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 TRAPPC6BQ86SZ2 158 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 HCAR1Q9BXC0 346 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 CHRDQ9H2X0 955 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 HIDE1A8MVS5 230 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 IRF2P14316 349 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 CNR1P21554 472 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 UBE2NP61088 152 aaKnown RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 SIRPAP78324 504 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 PDE7AQ13946 482 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 ADPRMQ3LIE5 342 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 LEXMQ3ZCV2 418 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 CTSL3PQ5NE16 218 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 B3GNT9Q6UX72 402 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 ABHD12BQ7Z5M8 362 aaPredicted RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 CADM3Q8N126 398 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 ZNF578Q96N58 590 aaPredicted RBP12.2□□□□□ -0.46
RNF43-208ENST00000584437 GNG13Q9P2W3 67 aa12.2□□□□□ -0.46
RNF43-208ENST00000584437 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 MDFIC2A0A1B0GVS7 189 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 TMEM269A0A1B0GVZ9 245 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 BLACEA4D250 179 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 HHEXQ03014 270 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SLC22A6Q4U2R8 563 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 MRPL21Q7Z2W9 205 aaKnown RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 CMIPQ8IY22 773 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SLC30A7Q8NEW0 376 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 ABHD5Q8WTS1 349 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 UBTD2Q8WUN7 234 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 RSC1A1Q92681 617 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 UQCC2Q9BRT2 126 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 STRADBQ9C0K7 418 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 ELOVL3Q9HB03 270 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 GALNT9Q9HCQ5 603 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 SERTAD4Q9NUC0 356 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 F5H5K5 113 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 MSTNO14793 375 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 ITGB2P05107 769 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 HIST1H1TP22492 207 aaPredicted RBP12.19□□□□□ -0.46
RNF43-208ENST00000584437 SPOCK1Q08629 439 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 MSMO1Q15800 293 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 KIAA0895LQ68EN5 471 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 DPY19L4Q7Z388 723 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 VRK2Q86Y07 508 aa12.19□□□□□ -0.46
RNF43-208ENST00000584437 ZNF808Q8N4W9 903 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms