RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 FRS3O43559 492 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 SYNGR3O43761 229 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 PIP5K1CO60331 668 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 PDYNP01213 254 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 CRYBA1P05813 215 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 TFPIP10646 304 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 GFAPP14136 432 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 CHN1P15882 459 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 MPGP29372 298 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 CCR4P51679 360 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 NPRL3Q12980 569 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 IFT88Q13099 833 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 C2orf68Q2NKX9 166 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 RPS27LQ71UM5 84 aaKnown RBP11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 CMC1Q7Z7K0 106 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 MTDHQ86UE4 582 aaKnown RBP11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 OR2L13Q8N349 312 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 TMCO5AQ8N6Q1 288 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 ATP6V1E2Q96A05 226 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 UBXN10Q96LJ8 280 aa11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 NSUN5Q96P11 429 aaKnown RBP11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 GPC6Q9Y625 555 aaPredicted RBP11.98□□□□□ -0.49
CSNK1D-213ENST00000580446 UGDHO60701 494 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 NGFRP08138 427 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 ACP2P11117 423 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 STMN1P16949 149 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 MPIP34949 423 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 RAD52P43351 418 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 ASMTP46597 345 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 ATP4BP51164 291 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 UBE2NP61088 152 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 RAE1P78406 368 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 DAG1Q14118 895 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 QPRTQ15274 297 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 TIGD2Q4W5G0 525 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 STEAP4Q687X5 459 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 TMPPEQ6ZT21 453 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 GLB1L3Q8NCI6 653 aaPredicted RBP11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 POP5Q969H6 163 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 MAGOHBQ96A72 148 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 ZNF416Q9BWM5 594 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 CHIAQ9BZP6 476 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 GLIPR2Q9H4G4 154 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 ELOVL6Q9H5J4 265 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 C3orf14Q9HBI5 128 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 UBAP1Q9NZ09 502 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 CMAHPQ9Y471 501 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 WIPI2Q9Y4P8 454 aa11.97□□□□□ -0.49
CSNK1D-213ENST00000580446 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 A0A087WV62 115 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 GNG14A0A1W2PPG7 69 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 ZNF503-AS2A6NEH8 195 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 CXorf49A8MYA2 514 aaPredicted RBP11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 MYO1GB0I1T2 1018 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 TRIM49D1C9J1S8 452 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 H0YL77 283 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 KCNK2O95069 426 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 GSNP06396 782 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 FNTAP49354 379 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 PRKAG1P54619 331 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 COL10A1Q03692 680 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 FASTKD3Q14CZ7 662 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 ZNF362Q5T0B9 420 aaPredicted RBP11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 SZRD1Q7Z422 152 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 TREML1Q86YW5 311 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 ELP4Q96EB1 424 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 TSPAN17Q96FV3 270 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 NAT9Q9BTE0 207 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 NOX3Q9HBY0 568 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 UBQLN4Q9NRR5 601 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 SLC6A13Q9NSD5 602 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 NECAP2Q9NVZ3 263 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 CPSF2Q9P2I0 782 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 LEF1Q9UJU2 399 aaPredicted RBP11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 AUP1Q9Y679 476 aa11.96□□□□□ -0.49
CSNK1D-213ENST00000580446 VSTM5A8MXK1 200 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 GPR171O14626 319 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 PCDH7O60245 1069 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 NDUFA7O95182 113 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 IGLV1-44P01699 117 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 TSPAN8P19075 237 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 GATA3P23771 443 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 P2RX1P51575 399 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 CCNG1P51959 295 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 CCL8P80075 99 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 DBPQ10586 325 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 TRAF3Q13114 568 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 PDK3Q15120 406 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 DEFB112Q30KQ8 113 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 C3orf33Q6P1S2 294 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 LRIG3Q6UXM1 1119 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 LINGO2Q7L985 606 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 MISPQ8IVT2 679 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 ZNF614Q8N883 585 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 LINC01006Q8NI28 216 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 C16orf78Q8WTQ4 265 aa11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 BCL2L2Q92843 193 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-213ENST00000580446 ITPKCQ96DU7 683 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms