RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ZNF141Q15928 474 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 NNATQ16517 81 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 KRTCAP3Q53RY4 240 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 PDZK1Q5T2W1 519 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 ZNF691Q5VV52 312 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 SPINK14Q6IE38 97 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 PODNL1Q6PEZ8 512 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 HSDL2Q6YN16 418 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 ANKRD37Q7Z713 158 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 LACC1Q8IV20 430 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 CDK20Q8IZL9 346 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 BEST3Q8N1M1 668 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 CLIP4Q8N3C7 705 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 OR4K5Q8NGD3 323 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 OR9Q2Q8NGE9 314 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 OR4D11Q8NGI4 311 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 ZNF721Q8TF20 911 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 HDAC2Q92769 488 aaKnown RBP9.27□□□□□ -0.93
SS18-210ENST00000578700 HSPBAP1Q96EW2 488 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 SLC41A3Q96GZ6 507 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 SIGLEC12Q96PQ1 595 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 SPOCK3Q9BQ16 436 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 DGCR6LQ9BY27 220 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 PRRG3Q9BZD7 231 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 GRIP2Q9C0E4 1043 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 RNF32Q9H0A6 362 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 ZNF700Q9H0M5 742 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 UBQLN4Q9NRR5 601 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 RLIMQ9NVW2 624 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 FBXO34Q9NWN3 711 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 TUBA8Q9NY65 449 aaPredicted RBP9.27□□□□□ -0.93
SS18-210ENST00000578700 NDUFA13Q9P0J0 144 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 SLC35A3Q9Y2D2 325 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 TPRKBQ9Y3C4 175 aa9.27□□□□□ -0.93
SS18-210ENST00000578700 INTS1Q8N201 2190 aaKnown RBP9.27□□□□□ -0.93
SS18-210ENST00000578700 ABCA2Q9BZC7 2435 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 SCN3AQ9NY46 2000 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 SERINC4A6NH21 518 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 GTPBP1O00178 669 aaKnown RBP9.26□□□□□ -0.93
SS18-210ENST00000578700 FRS3O43559 492 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 REM1O75628 298 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 IL33O95760 270 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 EPPINO95925 133 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 CSTAP01040 98 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 GASTP01350 101 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 CT45A8P0DMV1 189 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 CT45A9P0DMV2 189 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 OSMP13725 252 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 CD99P14209 185 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 ATP6V1B1P15313 513 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 POU1F1P28069 291 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 GGT2P36268 569 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 CD96P40200 585 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 RPL5P46777 297 aaKnown RBP9.26□□□□□ -0.93
SS18-210ENST00000578700 NR1H2P55055 460 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 PLCXD2Q0VAA5 305 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 TUBA3CQ13748 450 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 FGFBP1Q14512 234 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 OR1C1Q15619 314 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 NPTX1Q15818 432 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 MAPK14Q16539 360 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 CT45A2Q5DJT8 189 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 ACER2Q5QJU3 275 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 ANKRD34AQ69YU3 496 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 TUBA3EQ6PEY2 450 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 ZNF613Q6PF04 617 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 NPSR1Q6W5P4 371 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 LANCL3Q6ZV70 420 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 GALNTL5Q7Z4T8 443 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.26□□□□□ -0.93
SS18-210ENST00000578700 TMEM200AQ86VY9 491 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 GRAMD2AQ8IUY3 354 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 P3H2Q8IVL5 708 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 C17orf47Q8NEP4 570 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 B3GNT7Q8NFL0 401 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 OR4N2Q8NGD1 307 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 SLC7A13Q8TCU3 470 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 GNPDA2Q8TDQ7 276 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 ADAMTS16Q8TE57 1224 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 THAP3Q8WTV1 239 aaPredicted RBP9.26□□□□□ -0.93
SS18-210ENST00000578700 ACOT11Q8WXI4 607 aaPredicted RBP9.26□□□□□ -0.93
SS18-210ENST00000578700 DIO2Q92813 273 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 VMP1Q96GC9 406 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 HRASLS5Q96KN8 279 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 IMMP1LQ96LU5 166 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 HS6ST2Q96MM7 605 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 PITX2Q99697 317 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 UTP23Q9BRU9 249 aaKnown RBP9.26□□□□□ -0.93
SS18-210ENST00000578700 FAM192AQ9GZU8 254 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 WWTR1Q9GZV5 400 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 CTPS2Q9NRF8 586 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 COQ3Q9NZJ6 369 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 NDRG4Q9ULP0 352 aaKnown RBP9.26□□□□□ -0.93
SS18-210ENST00000578700 DTX4Q9Y2E6 619 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 ZNF835Q9Y2P0 537 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 SNX5Q9Y5X3 404 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 ACANP16112 2415 aa9.26□□□□□ -0.93
SS18-210ENST00000578700 LOC102723996A0A087X1L8 192 aa9.25□□□□□ -0.93
SS18-210ENST00000578700 NPIPA5A0A0B4J1W7 369 aa9.25□□□□□ -0.93
SS18-210ENST00000578700 SAGE2PA6NJ88 616 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms