RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 IGHV4-30-2A0A087WSY4 118 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 PDLIM1O00151 329 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 CD5LO43866 347 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 GPRIN2O60269 458 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 IGHV3-9P01782 118 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 UQCRC2P22695 453 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 CLK1P49759 484 aaKnown RBP7.55□□□□□ -1.2
CAPN3-213ENST00000565173 SLC16A1P53985 500 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 CDH11P55287 796 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 KCNJ10P78508 379 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 CHRNEQ04844 493 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 SPOCK1Q08629 439 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 GABRA6Q16445 453 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 B3GLCTQ6Y288 498 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 FRRS1Q6ZNA5 592 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 SSX8Q7RTT4 187 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 C16orf62Q7Z3J2 963 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 HMGN2P46Q86SG4 172 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 ANKRD46Q86W74 232 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 HIPK1Q86Z02 1210 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 NUDCD3Q8IVD9 361 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 CCDC103Q8IW40 242 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 OR52N5Q8NH56 324 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 CNOT9Q92600 299 aaKnown RBP7.55□□□□□ -1.2
CAPN3-213ENST00000565173 TESCQ96BS2 214 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 ROPN1LQ96C74 230 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 NEURL3Q96EH8 262 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 DNAJA3Q96EY1 480 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 RADILQ96JH8 1075 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 PKNOX2Q96KN3 472 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 TEX37Q96LM6 180 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 PPP1R36Q96LQ0 422 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 ZIM3Q96PE6 472 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 TMEM109Q9BVC6 243 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 OR11A1Q9GZK7 315 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 EXOSC3Q9NQT5 275 aaKnown RBP7.55□□□□□ -1.2
CAPN3-213ENST00000565173 POLE3Q9NRF9 147 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 EXD2Q9NVH0 621 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 CHRNA9Q9UGM1 479 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 SLC35A3Q9Y2D2 325 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 HDGFL3Q9Y3E1 203 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 WDR45Q9Y484 360 aa7.55□□□□□ -1.2
CAPN3-213ENST00000565173 ALPK2Q86TB3 2170 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 ANK2Q01484 3957 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 A0A1W2PR80 420 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 WDR91A4D1P6 747 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 HMGN4O00479 90 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 AP3D1O14617 1153 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 DNPH1O43598 174 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 TLX2O43763 284 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 SSX4O60224 188 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 RAD51DO75771 328 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 AGR2O95994 175 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 ITGA5P08648 1049 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 TFPIP10646 304 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 IMPDH2P12268 514 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 PTAFRP25105 342 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 CD40P25942 277 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 FKBP2P26885 142 aaKnown RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 TTKP33981 857 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 RYKP34925 604 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 IDH2P48735 452 aaKnown RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 ABCE1P61221 599 aaKnown RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 IFFO1Q0D2I5 559 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 MPP2Q14168 576 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 CHI3L2Q15782 390 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 PDCD2Q16342 344 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 SPANXN4Q5MJ08 99 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 ATAD3BQ5T9A4 648 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 ANXA8L1Q5VT79 327 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 AGAP6Q5VW22 663 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 TNFAIP8L2Q6P589 184 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 GRINAQ7Z429 371 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 PIAS4Q8N2W9 510 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 WDR31Q8NA23 367 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 SORT1Q99523 831 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 DHRS9Q9BPW9 319 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 CACNG6Q9BXT2 260 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 DPY30Q9C005 99 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 AMBRA1Q9C0C7 1298 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 SLC38A1Q9H2H9 487 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 BARX1Q9HBU1 254 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 CBLN4Q9NTU7 201 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 FAIMQ9NVQ4 179 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 ASB6Q9NWX5 421 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 TAS2R16Q9NYV7 291 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 EMC3Q9P0I2 261 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 TMEM181Q9P2C4 612 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 MALT1Q9UDY8 824 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 HAO1Q9UJM8 370 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 PCDHGB4Q9UN71 923 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 MGAT4BQ9UQ53 548 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 TRAPPC4Q9Y296 219 aa7.54□□□□□ -1.2
CAPN3-213ENST00000565173 NOSIPQ9Y314 301 aaKnown RBP7.54□□□□□ -1.2
CAPN3-213ENST00000565173 PLCE1Q9P212 2302 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 TMED7-TICAM2A0A0A6YYA0 188 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 CIB4A0PJX0 185 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 TMEM72A0PK05 275 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms