RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 TFPIP10646 304 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 BMP4P12644 408 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 MATN1P21941 496 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 THBS2P35442 1172 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 APOBEC1P41238 236 aaKnown RBP12.38□□□□□ -0.43
CDR2-204ENST00000564542 SLC16A1P53985 500 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 GABRA6Q16445 453 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 ARHGAP11BQ3KRB8 267 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 KRTAP24-1Q3LI83 254 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 C6orf136Q5SQH8 315 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 IL23RQ5VWK5 629 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 CYB5R2Q6BCY4 276 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 FNDC5Q8NAU1 212 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 AGR3Q8TD06 166 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 EPS8L3Q8TE67 593 aaKnown RBP12.38□□□□□ -0.43
CDR2-204ENST00000564542 OIT3Q8WWZ8 545 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 APOPT1Q96IL0 206 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 C3orf30Q96M34 536 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 MUS81Q96NY9 551 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 DUSP26Q9BV47 211 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 AMBRA1Q9C0C7 1298 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 SHARPINQ9H0F6 387 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 MKS1Q9NXB0 559 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 CHRNA9Q9UGM1 479 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 MKLN1Q9UL63 735 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 HDGFL3Q9Y3E1 203 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 SVEP1Q4LDE5 3571 aa12.38□□□□□ -0.43
CDR2-204ENST00000564542 RNF103-CHMP3A0A140T963 221 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 PDLIM1O00151 329 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 KIAA0513O60268 411 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 MRPL33O75394 65 aaKnown RBP12.37□□□□□ -0.43
CDR2-204ENST00000564542 GUSBP08236 651 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 ITGA5P08648 1049 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 IGHV4-31P0DP07 118 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 USF1P22415 310 aaPredicted RBP12.37□□□□□ -0.43
CDR2-204ENST00000564542 FKBP2P26885 142 aaKnown RBP12.37□□□□□ -0.43
CDR2-204ENST00000564542 ALDH3A1P30838 453 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 NTF4P34130 210 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 PGM1P36871 562 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 EFNA4P52798 201 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 C16orf62Q7Z3J2 963 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 GRINAQ7Z429 371 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 C6orf120Q7Z4R8 191 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 C17orf78Q8N4C9 275 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 C1orf162Q8NEQ5 155 aaPredicted RBP12.37□□□□□ -0.43
CDR2-204ENST00000564542 UBLCP1Q8WVY7 318 aaPredicted RBP12.37□□□□□ -0.43
CDR2-204ENST00000564542 ARL5BQ96KC2 179 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 SLC35G5Q96KT7 338 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 RHOXF2Q9BQY4 288 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 CTPS2Q9NRF8 586 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 EXD2Q9NVH0 621 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 SLC35A3Q9Y2D2 325 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 NUP214P35658 2090 aaPredicted RBP12.37□□□□□ -0.43
CDR2-204ENST00000564542 ALPK2Q86TB3 2170 aa12.37□□□□□ -0.43
CDR2-204ENST00000564542 SLU7O95391 586 aaKnown RBP12.36□□□□□ -0.43
CDR2-204ENST00000564542 MAGEA8P43361 318 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 CLK1P49759 484 aaKnown RBP12.36□□□□□ -0.43
CDR2-204ENST00000564542 FOXG1P55316 489 aaPredicted RBP12.36□□□□□ -0.43
CDR2-204ENST00000564542 CHRNB3Q05901 458 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 MAPK14Q16539 360 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 C1QTNF12Q5T7M4 302 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 TYW3Q6IPR3 259 aaKnown RBP12.36□□□□□ -0.43
CDR2-204ENST00000564542 CASP12Q6UXS9 341 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 OLIG3Q7RTU3 272 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 CLECL1Q8IZS7 167 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 WDR31Q8NA23 367 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 ZNF563Q8TA94 476 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 MIPOL1Q8TD10 442 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 MECRQ9BV79 373 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 POLE3Q9NRF9 147 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 DCTN4Q9UJW0 460 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 SLC9A8Q9Y2E8 581 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 AMDHD2Q9Y303 409 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 PMF1-BGLAPU3KQ54 211 aa12.36□□□□□ -0.43
CDR2-204ENST00000564542 RNASET2O00584 256 aaKnown RBP12.35□□□□□ -0.43
CDR2-204ENST00000564542 LMX1BO60663 402 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 BCAS1O75363 584 aaPredicted RBP12.35□□□□□ -0.43
CDR2-204ENST00000564542 SKAP2O75563 359 aaPredicted RBP12.35□□□□□ -0.43
CDR2-204ENST00000564542 AGR2O95994 175 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 C8BP07358 591 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 G6PDP11413 515 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 SRD5A1P18405 259 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 IGFBP5P24593 272 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 APOBEC3AP31941 199 aaPredicted RBP12.35□□□□□ -0.43
CDR2-204ENST00000564542 SERPINB5P36952 375 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 GZMKP49863 264 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 CLDN8P56748 225 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 PHC1P78364 1004 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.434e-6■□□□□ 10.9
CDR2-204ENST00000564542 H3F3AP84243 136 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 PGS1Q32NB8 556 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 EMBQ6PCB8 327 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 ZCCHC23Q6ZST2 131 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 CCDC103Q8IW40 242 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 CLEC4FQ8N1N0 589 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 EIF1ADQ8N9N8 165 aaKnown RBP12.35□□□□□ -0.43
CDR2-204ENST00000564542 OR52E4Q8NGH9 312 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 TUBGCP3Q96CW5 907 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms