RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 AKAIN1P0CW23 69 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 FUT1P19526 365 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 S1PR1P21453 382 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 HIST1H1TP22492 207 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 LUMP51884 338 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ERVK-21P61565 698 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 OR1Q1Q15612 314 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 LTB4RQ15722 352 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 YOD1Q5VVQ6 348 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 UNQ6126/PRO20091Q6UXV3 157 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 TMUB2Q71RG4 321 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ERN2Q76MJ5 926 aaKnown RBP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ASPGQ86U10 573 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 PXT1Q8NFP0 134 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 SCARB1Q8WTV0 552 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF559Q9BR84 538 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 PELOQ9BRX2 385 aaKnown RBP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF768Q9H5H4 540 aaKnown RBP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 NPFFR2Q9Y5X5 522 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ATAD5Q96QE3 1844 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 IFNA21P01568 189 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF20P17024 532 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 RAB3AP20336 220 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 LTBQ06643 244 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 SLC25A35Q3KQZ1 300 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 OR5M10Q6IEU7 315 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ZFP82Q8N141 532 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 WFIKKN2Q8TEU8 576 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 TCEAL3Q969E4 200 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 AMDHD1Q96NU7 426 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 CLSTN3Q9BQT9 956 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 SEC61A2Q9H9S3 476 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 COL4A5P29400 1685 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 NPC1O15118 1278 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 UBBP0CG47 229 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 UBCP0CG48 685 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 SEC61A1P61619 476 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 FOXK2Q01167 660 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 RBMS2Q15434 407 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 FBXO42Q6P3S6 717 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF550Q7Z398 422 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 GRASPQ7Z6J2 395 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 ZMAT3Q9HA38 289 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 RPS10P5Q9NQ39 176 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 EDDM13A0A1B0GTR0 161 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 AGAP14A8MT82 685 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF736B4DX44 427 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 PLGP00747 810 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 CSF1P09603 554 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 MAP2K6P52564 334 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF585AQ6P3V2 769 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 GDF7Q7Z4P5 450 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 GLB1L2Q8IW92 636 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 SLC16A11Q8NCK7 471 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 OR2A12Q8NGT7 310 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 C2CD4CQ8TF44 421 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 ZBTB8AQ96BR9 441 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 TRMT61AQ96FX7 289 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 FOXN4Q96NZ1 517 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 MS4A4EQ96PG1 132 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 CWH43Q9H720 699 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 LIN7BQ9HAP6 207 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 MED17Q9NVC6 651 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 SOX1O00570 391 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 WISP3O95389 354 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 HLA-AP01891 365 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 CXCL3P19876 107 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 IL13RA1P78552 427 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 MRPS10P82664 201 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 TNFRSF17Q02223 184 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 CHAF1BQ13112 559 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 UBE2NLQ5JXB2 153 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 FAM74A1Q5RGS3 127 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 MRPL2Q5T653 305 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 TMPRSS9Q7Z410 1059 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 TMEM150AQ86TG1 271 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 STEAP2Q8NFT2 490 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 MFSD8Q8NHS3 518 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 ZFPM2Q8WW38 1151 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 AHCYL2Q96HN2 611 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 TEAD3Q99594 435 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 MED18Q9BUE0 208 aa11.73□□□□□ -0.53
COMMD4-209ENST00000564068 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 CPEB1Q9BZB8 566 aaKnown RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 PRMT8Q9NR22 394 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-209ENST00000564068 LDB3O75112 727 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 LGI1O95970 557 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 AKT2P31751 481 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 CSRP3P50461 194 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 PDE7AQ13946 482 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 IRF3Q14653 427 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 CLLU1Q5K131 121 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 HENMT1Q5T8I9 393 aaKnown RBP11.72□□□□□ -0.53
COMMD4-209ENST00000564068 MBOAT2Q6ZWT7 520 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 SLC51BQ86UW2 128 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 ARL14Q8N4G2 192 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 DNAAF1Q8NEP3 725 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 NEK7Q8TDX7 302 aa11.72□□□□□ -0.53
COMMD4-209ENST00000564068 RADILQ96JH8 1075 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms