RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 USP22Q9UPT9 525 aa16■□□□□ 0.15
KATNB1-202ENST00000562542 SERINC4A6NH21 518 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 ETV2O00321 342 aaPredicted RBP15.99■□□□□ 0.15
KATNB1-202ENST00000562542 SEC22BO75396 215 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 RSL1D1O76021 490 aaKnown RBP15.99■□□□□ 0.15
KATNB1-202ENST00000562542 IMPDH1P20839 514 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 EPHA1P21709 976 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 SERPINB9P50453 376 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 MIDNQ504T8 468 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 C1QTNF12Q5T7M4 302 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 USP43Q70EL4 1123 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 FAM120BQ96EK7 910 aaKnown RBP15.99■□□□□ 0.15
KATNB1-202ENST00000562542 KATNB1Q9BVA0 655 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 REEP4Q9H6H4 257 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 NARFLQ9H6Q4 476 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 DYNLRB1Q9NP97 96 aa15.99■□□□□ 0.15
KATNB1-202ENST00000562542 RRAGDQ9NQL2 400 aaPredicted RBP15.99■□□□□ 0.15
KATNB1-202ENST00000562542 ACSS1Q9NUB1 689 aaPredicted RBP15.99■□□□□ 0.15
KATNB1-202ENST00000562542 SPIN1Q9Y657 262 aaPredicted RBP15.99■□□□□ 0.15
KATNB1-202ENST00000562542 SH3PXD2BA1X283 911 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 TRIM49D1C9J1S8 452 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 hCG_2039718K7EN88 272 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 MPGP29372 298 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 SLC16A1P53985 500 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 OR2B6P58173 313 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 C2orf54Q08AI8 447 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 RIN1Q13671 783 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 EXOSC6Q5RKV6 272 aaKnown RBP15.98■□□□□ 0.15
KATNB1-202ENST00000562542 TSPO2Q5TGU0 170 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 SHISA2Q6UWI4 295 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 ADAMTS15Q8TE58 950 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 PAFAH2Q99487 392 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 FAF1Q9UNN5 650 aaPredicted RBP15.98■□□□□ 0.15
KATNB1-202ENST00000562542 SLC9A8Q9Y2E8 581 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 SPEF1Q9Y4P9 236 aa15.98■□□□□ 0.15
KATNB1-202ENST00000562542 VSTM5A8MXK1 200 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 ESPNB1AK53 854 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 LYNX1G3V0Z9 82 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 SKAP2O75563 359 aaPredicted RBP15.97■□□□□ 0.15
KATNB1-202ENST00000562542 PMS2P2O95744 297 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 LYNX1P0DP58 116 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 ATP5F1P24539 256 aaPredicted RBP15.97■□□□□ 0.15
KATNB1-202ENST00000562542 IL1RL1Q01638 556 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 ADRM1Q16186 407 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 PDZK1Q5T2W1 519 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 FAHD2BQ6P2I3 314 aaPredicted RBP15.97■□□□□ 0.15
KATNB1-202ENST00000562542 TRIM46Q7Z4K8 759 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 SLC22A9Q8IVM8 553 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 CCNYL1Q8N7R7 359 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 SPATA4Q8NEY3 305 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 CLHC1Q8NHS4 586 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 FAHD2AQ96GK7 314 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 ZNF764Q96H86 408 aaPredicted RBP15.97■□□□□ 0.15
KATNB1-202ENST00000562542 TSSK3Q96PN8 268 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 LRRC37BQ96QE4 947 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 ZNF747Q9BV97 191 aa15.97■□□□□ 0.15
KATNB1-202ENST00000562542 POC1B-GALNT4F8VUJ3 575 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 MSMBP08118 114 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 GSTA1P08263 222 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 FRKP42685 505 aaPredicted RBP15.96■□□□□ 0.15
KATNB1-202ENST00000562542 PRKAA2P54646 552 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 SKP2Q13309 424 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 TP53BP2Q13625 1128 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 PDCD2Q16342 344 aaPredicted RBP15.96■□□□□ 0.15
KATNB1-202ENST00000562542 TREML4Q6UXN2 200 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 SPATA21Q7Z572 469 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 L3HYPDHQ96EM0 354 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 ARL5BQ96KC2 179 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 ACTRT3Q9BYD9 372 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 LAT2Q9GZY6 243 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 OBP2BQ9NPH6 170 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 ACER3Q9NUN7 267 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 NINJ2Q9NZG7 142 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 TMEM216Q9P0N5 145 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 CHRNA9Q9UGM1 479 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 HDGFL3Q9Y3E1 203 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 KCNE3Q9Y6H6 103 aa15.96■□□□□ 0.15
KATNB1-202ENST00000562542 NPIPB9F8W1W9 429 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 DNPH1O43598 174 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 KRT33AO76009 404 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 KRT16P08779 473 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 UBTFL6P0CB48 400 aaPredicted RBP15.95■□□□□ 0.14
KATNB1-202ENST00000562542 NPR2P20594 1047 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 APOBEC1P41238 236 aaKnown RBP15.95■□□□□ 0.14
KATNB1-202ENST00000562542 ARFIP2P53365 341 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 UBE2NP61088 152 aaKnown RBP15.95■□□□□ 0.14
KATNB1-202ENST00000562542 NAAAQ02083 359 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 SPDYE7PQ495Y7 208 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 TEX29Q8N6K0 151 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 OR4F15Q8NGB8 312 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 OR51F2Q8NH61 342 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 ZNF563Q8TA94 476 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 MRPL24Q96A35 216 aaKnown RBP15.95■□□□□ 0.14
KATNB1-202ENST00000562542 SUCNR1Q9BXA5 334 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 OR11A1Q9GZK7 315 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 TPK1Q9H3S4 243 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 GSTO2Q9H4Y5 243 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 CTPS2Q9NRF8 586 aa15.95■□□□□ 0.14
KATNB1-202ENST00000562542 SIRT3Q9NTG7 399 aaPredicted RBP15.95■□□□□ 0.14
KATNB1-202ENST00000562542 FLVCR1Q9Y5Y0 555 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms