RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 METTL2AQ96IZ6 378 aaKnown RBP9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 FOXN4Q96NZ1 517 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 SORCS2Q96PQ0 1159 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 ADAM19Q9H013 955 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 TNFRSF12AQ9NP84 129 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 DCDC2Q9UHG0 476 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 MOKQ9UQ07 419 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 AMDHD2Q9Y303 409 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 KCNE3Q9Y6H6 103 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 DYSFO75923 2080 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 IGHV4-61A0A0C4DH41 118 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 GOLGA8QA0A0J9YX86 632 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 GOLGA8OA6NCC3 632 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 SERINC4A6NH21 518 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 GOLGA8NF8WBI6 632 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 AZIN1O14977 448 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 TBX19O60806 448 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 KRT33AO76009 404 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 WNT11O96014 354 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 ITGA2P17301 1181 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 RYKP34925 604 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 RPL3P39023 403 aaKnown RBP9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 FRKP42685 505 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 FOXG1P55316 489 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 NAA20P61599 178 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 TGFBR3Q03167 851 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 KIAA0040Q15053 153 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 GABRA6Q16445 453 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC25A53Q5H9E4 307 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 LIPMQ5VYY2 423 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 ABLIM2Q6H8Q1 611 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 MTDHQ86UE4 582 aaKnown RBP9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 RFLNBQ8N5W9 214 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR5D16Q8NGK9 328 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 ACMSDQ8TDX5 336 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 ST8SIA1Q92185 356 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 MTERF3Q96E29 417 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 ZNF764Q96H86 408 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 C1orf159Q96HA4 380 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR7D2Q96RA2 312 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 PARD6BQ9BYG5 372 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 PLA2G12AQ9BZM1 189 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 BPESC1Q9GZL8 116 aa9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 SIRT3Q9NTG7 399 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 PSMC3IPQ9P2W1 217 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPB-207ENST00000560492 LOC390937A0A1W2PQ73 354 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 LRP5LA4QPB2 252 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 TMEM114B3SHH9 223 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 G3V2L1 256 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 SCAMP2O15127 329 aaKnown RBP9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 SPRY1O43609 319 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 C6orf47O95873 294 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 ERCC1P07992 297 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 ITGA5P08648 1049 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 BCKDHAP12694 445 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 ZNF23P17027 643 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 PRPH2P23942 346 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 MAPK1P28482 360 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 PRPS1P60891 318 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 RPS26P62854 115 aaKnown RBP9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 ACTG1P63261 375 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 PDE7AQ13946 482 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 LSM12Q3MHD2 195 aaKnown RBP9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 RFTN2Q52LD8 501 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 RINLQ6ZS11 566 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 C16orf62Q7Z3J2 963 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 CCDC103Q8IW40 242 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 ZNF540Q8NDQ6 660 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR2T11Q8NH01 316 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR5P2Q8WZ92 322 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 ZNF524Q96C55 264 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 LAT2Q9GZY6 243 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 MYOZ1Q9NP98 299 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC17A5Q9NRA2 495 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 CTPS2Q9NRF8 586 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 ATAD3AQ9NVI7 634 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 MALT1Q9UDY8 824 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 CHRNA9Q9UGM1 479 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 MKLN1Q9UL63 735 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 TMED5Q9Y3A6 229 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 CCL27Q9Y4X3 112 aa9.18□□□□□ -0.94
CDC42BPB-207ENST00000560492 IGKV3D-15A0A087WSY6 115 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 ZNF716A6NP11 495 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 VWC2LB2RUY7 222 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 KLF11O14901 512 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 ANKRD28O15084 1053 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 STX11O75558 287 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 SNUPNO95149 360 aaKnown RBP9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 PMS2P2O95744 297 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 LAMP1P11279 417 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 CPA3P15088 417 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 MATN1P21941 496 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 APEX1P27695 318 aaKnown RBP9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 GCAP28676 217 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 APOBEC1P41238 236 aaKnown RBP9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 CHN2P52757 468 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 VSNL1P62760 191 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC25A3Q00325 362 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 SKP2Q13309 424 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 PDK3Q15120 406 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms