RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 DNPH1O43598 174 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 PMS2P2O95744 297 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 SOD3P08294 240 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 ALDOCP09972 364 aaKnown RBP12.94□□□□□ -0.34
SHMT2-235ENST00000557740 COX5AP20674 150 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 IGHV1-2P23083 117 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 EDNRAP25101 427 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 FKBP2P26885 142 aaKnown RBP12.94□□□□□ -0.34
SHMT2-235ENST00000557740 HTR3AP46098 478 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 CDH11P55287 796 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 UFM1P61960 85 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 CHRNEQ04844 493 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 LRRC74AQ0VAA2 488 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 VEZF1Q14119 521 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 MPP2Q14168 576 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 GNA13Q14344 377 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 PDK3Q15120 406 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 ETFDHQ16134 617 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 TIMM23BQ5SRD1 257 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 SEZ6L2Q6UXD5 910 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 SPATA19Q7Z5L4 167 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 CMIPQ8IY22 773 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 NEUROG1Q92886 237 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 ZBTB9Q96C00 473 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 DNAJA3Q96EY1 480 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 ARL5BQ96KC2 179 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 TRNT1Q96Q11 434 aaKnown RBP12.94□□□□□ -0.34
SHMT2-235ENST00000557740 OR52E6Q96RD3 313 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 OR11A1Q9GZK7 315 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 ALG2Q9H553 416 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 AIG1Q9NVV5 245 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 LIPT1Q9Y234 373 aa12.94□□□□□ -0.34
SHMT2-235ENST00000557740 MAGED1Q9Y5V3 778 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-235ENST00000557740 DPRXA6NFQ7 191 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 CCDC154A6NI56 674 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 CCT8L1PA6NM43 557 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 TRPC5OSA6NMA1 111 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 SDHDO14521 159 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 RAD51DO75771 328 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 IGHV3-9P01782 118 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 PGRP06401 933 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 DANCRP0C864 163 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 UQCRBP14927 111 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 CCNA2P20248 432 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 IDH2P48735 452 aaKnown RBP12.93□□□□□ -0.34
SHMT2-235ENST00000557740 CLK1P49759 484 aaKnown RBP12.93□□□□□ -0.34
SHMT2-235ENST00000557740 OR2B6P58173 313 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 FAPQ12884 760 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 CLEC12BQ2HXU8 276 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 FBXW9Q5XUX1 488 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 AP1ARQ63HQ0 302 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 ZNF621Q6ZSS3 439 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 P2RY8Q86VZ1 359 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 ZNF433Q8N7K0 673 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-235ENST00000557740 ANKFN1Q8N957 763 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 WDR60Q8WVS4 1066 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 CNOT9Q92600 299 aaKnown RBP12.93□□□□□ -0.34
SHMT2-235ENST00000557740 DDIT4LQ96D03 193 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 ZG16BQ96DA0 208 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 TEX37Q96LM6 180 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 TRIM2Q9C040 744 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 FAIMQ9NVQ4 179 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 HEATR5AQ86XA9 2040 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
SHMT2-235ENST00000557740 TMED7-TICAM2A0A0A6YYA0 188 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 GOLGA8QA0A0J9YX86 632 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 CIB4A0PJX0 185 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 PRAMEF27A3QJZ7 478 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 GOLGA8OA6NCC3 632 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 AGAP5A6NIR3 686 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 OR5H1A6NKK0 313 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 ZNF716A6NP11 495 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 GOLGA8NF8WBI6 632 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 OVOL3O00110 214 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 HDAC3O15379 428 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 MRPL33O75394 65 aaKnown RBP12.92□□□□□ -0.34
SHMT2-235ENST00000557740 CHRM4P08173 479 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 NR2F1P10589 423 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 EPHA3P29320 983 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 CDKN1AP38936 164 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 MAGEA8P43361 318 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 POLR2HP52434 150 aaKnown RBP12.92□□□□□ -0.34
SHMT2-235ENST00000557740 TNK1Q13470 666 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 SYPL1Q16563 259 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 TNFAIP8L3Q5GJ75 292 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 CASP12Q6UXS9 341 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 LRRC74BQ6ZQY2 392 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 ADGRG3Q86Y34 549 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 PNPT1Q8TCS8 783 aaKnown RBP12.92□□□□□ -0.34
SHMT2-235ENST00000557740 INPP5KQ9BT40 448 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 SLC38A1Q9H2H9 487 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 ASB6Q9NWX5 421 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 TMED7Q9Y3B3 224 aa12.92□□□□□ -0.34
SHMT2-235ENST00000557740 ZANQ9Y493 2812 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 CADP27708 2225 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 TMEM120BA0PK00 339 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 CFAP73A6NFT4 308 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 SHISA9B4DS77 424 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 INAFM1C9JVW0 142 aa12.91□□□□□ -0.34
SHMT2-235ENST00000557740 AP3D1O14617 1153 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms