RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 RPS6KB2Q9UBS0 482 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 RIMS3Q9UJD0 308 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 TMED7Q9Y3B3 224 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 SPIN1Q9Y657 262 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-219ENST00000555323 KALRNO60229 2985 aa11.42□□□□□ -0.58
SYNE2-219ENST00000555323 A0A0J9YW62 118 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 TMEM72A0PK05 275 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 CPSF4LA6NMK7 179 aaKnown RBP11.41□□□□□ -0.58
SYNE2-219ENST00000555323 A8MVM7 634 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 PRRG2O14669 202 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 ZNHIT1O43257 154 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 WDR1O75083 606 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 GPIP06744 558 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 STSP08842 583 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 GABRA1P14867 456 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 ABOP16442 354 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 POU3F2P20265 443 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-219ENST00000555323 IFNA8P32881 189 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 CLDN20P56880 219 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 TAS2R41P59536 307 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 EGR4Q05215 589 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 CHRNB3Q05901 458 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 ST3GAL3Q11203 375 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 SF3B4Q15427 424 aaKnown RBP eCLIP11.41□□□□□ -0.58
SYNE2-219ENST00000555323 IGFBP7Q16270 282 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 TMEM176BQ3YBM2 270 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-219ENST00000555323 SYT14P1Q58G82 188 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 C5orf46Q6UWT4 87 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 DEF8Q6ZN54 512 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 GDF7Q7Z4P5 450 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 ZNF605Q86T29 641 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 DOLPP1Q86YN1 238 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 ADGRG5Q8IZF4 528 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 MEIOBQ8N635 442 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 PAPD5Q8NDF8 572 aaKnown RBP11.41□□□□□ -0.58
SYNE2-219ENST00000555323 PIK3C3Q8NEB9 887 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 STK35Q8TDR2 534 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 CANT1Q8WVQ1 401 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 DUS3LQ96G46 650 aaKnown RBP11.41□□□□□ -0.58
SYNE2-219ENST00000555323 SLC41A3Q96GZ6 507 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 KLHL15Q96M94 604 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 ZNF347Q96SE7 839 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 PNPLA3Q9NST1 481 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 CCM2LQ9NUG4 571 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-219ENST00000555323 PAQR5Q9NXK6 330 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-219ENST00000555323 TRAPPC4Q9Y296 219 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 HDGFL3Q9Y3E1 203 aa11.41□□□□□ -0.58
SYNE2-219ENST00000555323 POLEQ07864 2286 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 DHRS12A0PJE2 317 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 ELOA3DA6NLF2 546 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-219ENST00000555323 J3KTA2 159 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 FZD7O75084 574 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 FABP3P05413 133 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 RAP2AP10114 183 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 NQO1P15559 274 aaKnown RBP11.4□□□□□ -0.58
SYNE2-219ENST00000555323 SHC1P29353 583 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 HMGA2P52926 109 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 ACTR3P61158 418 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 GTF3C1Q12789 2109 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 ELOA3BQ3SY89 546 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 FAM98BQ52LJ0 330 aaKnown RBP11.4□□□□□ -0.58
SYNE2-219ENST00000555323 C1orf146Q5VVC0 180 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 TMPPEQ6ZT21 453 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 SPATA24Q86W54 205 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 ATCAYQ86WG3 371 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 ZDHHC21Q8IVQ6 265 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 OFCC1Q8IZS5 231 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 ELOA3Q8NG57 546 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 OR6S1Q8NH40 331 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 DDIT4LQ96D03 193 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 DHRS1Q96LJ7 313 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 RAB3IPQ96QF0 476 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-219ENST00000555323 SEPHS2Q99611 448 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 TMEM43Q9BTV4 400 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 ANKRD19PQ9H560 264 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 NMNAT1Q9HAN9 279 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-219ENST00000555323 SELENONQ9NZV5 590 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 SLC7A7Q9UM01 511 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 FAM32AQ9Y421 112 aaKnown RBP11.4□□□□□ -0.58
SYNE2-219ENST00000555323 V9GYQ6 96 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 SVILO95425 2214 aa11.4□□□□□ -0.58
SYNE2-219ENST00000555323 MED12Q93074 2177 aa11.4□□□□□ -0.59
SYNE2-219ENST00000555323 CHD6Q8TD26 2715 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 IGKV1D-42A0A075B6H8 117 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 A0A1W2PRQ8 180 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 ZC3H12DA2A288 527 aaKnown RBP11.39□□□□□ -0.59
SYNE2-219ENST00000555323 HTR3EA5X5Y0 456 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CD8B2A6NJW9 211 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 FIGNL2A6NMB9 653 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 H0YC42 278 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CIB2O75838 187 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 IGF2P01344 180 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 TPOP07202 933 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 RBM34P42696 430 aaKnown RBP11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CA7P43166 264 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 YAP1P46937 504 aaKnown RBP11.39□□□□□ -0.59
SYNE2-219ENST00000555323 TPD52P55327 224 aaPredicted RBP11.39□□□□□ -0.59
SYNE2-219ENST00000555323 CARD18P57730 90 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 RAC3P60763 192 aa11.39□□□□□ -0.59
SYNE2-219ENST00000555323 RPS3AP61247 264 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms