RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PDLIM4P50479 330 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 RNF144AP50876 292 aaPredicted RBP8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 RPL38P63173 70 aaKnown RBP8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 SPOCK1Q08629 439 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 MERTKQ12866 999 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 SKP2Q13309 424 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 ARHGAP11BQ3KRB8 267 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 PDZK1Q5T2W1 519 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 LIPNQ5VXI9 398 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 BHLHB9Q6PI77 547 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 C17orf53Q8N3J3 647 aaPredicted RBP8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 C17orf78Q8N4C9 275 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 C1orf162Q8NEQ5 155 aaPredicted RBP8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 SFXN5Q8TD22 340 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 OIT3Q8WWZ8 545 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 ANP32BQ92688 251 aaKnown RBP8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 MSI2Q96DH6 328 aaKnown RBP8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 ZHX1-C8orf76Q96EF9 292 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 OR7D2Q96RA2 312 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 CCDC106Q9BWC9 280 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 TXLNGYQ9BZA5 131 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 ATAD3AQ9NVI7 634 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 PARPBPQ9NWS1 579 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 TBK1Q9UHD2 729 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 KCNS2Q9ULS6 477 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 TRAPPC4Q9Y296 219 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 HDGFL3Q9Y3E1 203 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 ATP23Q9Y6H3 246 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 LOC390937A0A1W2PQ73 354 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 ANKRD28O15084 1053 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 FCMRO60667 390 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 UGT2B17O75795 530 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 AK1P00568 194 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 CSTAP01040 98 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 ITGA5P08648 1049 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 ZNF16P17020 682 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 HNF1AP20823 631 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 MAPK1P28482 360 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 PGM1P36871 562 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 MAGEA8P43361 318 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 FOXG1P55316 489 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 PHC1P78364 1004 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 TGFBR3Q03167 851 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 TP53BP2Q13625 1128 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 GPR68Q15743 365 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 GALNTL6Q49A17 601 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 KANK2Q63ZY3 851 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 EIF3MQ7L2H7 374 aaKnown RBP8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 ADGRG3Q86Y34 549 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 RIMKLAQ8IXN7 391 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 TMCO5AQ8N6Q1 288 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 ZNF614Q8N883 585 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 PLPP7Q8NBV4 271 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 ZNF540Q8NDQ6 660 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 MNS1Q8NEH6 495 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 PIGXQ8TBF5 258 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 PPP3R2Q96LZ3 170 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 FOXN4Q96NZ1 517 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 PRPF18Q99633 342 aaKnown RBP8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 GATA5Q9BWX5 397 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 C1QTNF6Q9BXI9 259 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 MYOZ1Q9NP98 299 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 SLC17A5Q9NRA2 495 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 CHRNA9Q9UGM1 479 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 DCTN4Q9UJW0 460 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 AMDHD2Q9Y303 409 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 TRAF6Q9Y4K3 522 aa8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 SPIN1Q9Y657 262 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-207ENST00000550051 A0A1W2PR80 420 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 TRIM13O60858 407 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 LY6HO94772 140 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 C6orf47O95873 294 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 TFPIP10646 304 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 PRPS1L1P21108 318 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 MATN1P21941 496 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 PAX7P23759 505 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 CCR4P51679 360 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 MAP2K6P52564 334 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 PRPS1P60891 318 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 HBA1P69905 142 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 GGTLC2Q14390 218 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 SPDYE7PQ495Y7 208 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 GRINAQ7Z429 371 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 C6orf120Q7Z4R8 191 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 C10orf107Q8IVU9 208 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 CCDC103Q8IW40 242 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 IFT20Q8IY31 132 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 RFLNBQ8N5W9 214 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 FAM71CQ8NEG0 241 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 OR52E4Q8NGH9 312 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 OR5D16Q8NGK9 328 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 MIPOL1Q8TD10 442 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 PMM1Q92871 262 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 ARL5BQ96KC2 179 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 PIMREGQ9BSJ6 248 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 BHLHE41Q9C0J9 482 aaPredicted RBP8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 ZNF350Q9GZX5 532 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 SAP130Q9H0E3 1048 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 CTPS2Q9NRF8 586 aa8.61□□□□□ -1.03
TRAFD1-207ENST00000550051 POLE3Q9NRF9 147 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms