RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 NUDT7P0C024 238 aa14.07□□□□□ -0.16
COX6A1-203ENST00000550009 PRG2P13727 222 aa14.07□□□□□ -0.16
COX6A1-203ENST00000550009 CAPRIN1Q14444 709 aaKnown RBP14.07□□□□□ -0.16
COX6A1-203ENST00000550009 MRPL2Q5T653 305 aaKnown RBP14.07□□□□□ -0.16
COX6A1-203ENST00000550009 BHLHA15Q7RTS1 189 aaPredicted RBP14.07□□□□□ -0.16
COX6A1-203ENST00000550009 C10orf111Q8N326 155 aa14.07□□□□□ -0.16
COX6A1-203ENST00000550009 ARFGAP2Q8N6H7 521 aa14.07□□□□□ -0.16
COX6A1-203ENST00000550009 VPS37AQ8NEZ2 397 aa14.07□□□□□ -0.16
COX6A1-203ENST00000550009 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.07□□□□□ -0.16
COX6A1-203ENST00000550009 KLHL9Q9P2J3 617 aa14.07□□□□□ -0.16
COX6A1-203ENST00000550009 CHRNA9Q9UGM1 479 aa14.07□□□□□ -0.16
COX6A1-203ENST00000550009 OSGIN1Q9UJX0 560 aa14.07□□□□□ -0.16
COX6A1-203ENST00000550009 SLC35A3Q9Y2D2 325 aa14.07□□□□□ -0.16
COX6A1-203ENST00000550009 TMED7-TICAM2A0A0A6YYA0 188 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 SNUPNO95149 360 aaKnown RBP14.06□□□□□ -0.16
COX6A1-203ENST00000550009 PABPC4LP0CB38 370 aaKnown RBP14.06□□□□□ -0.16
COX6A1-203ENST00000550009 NR2F1P10589 423 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 PPP3CBP16298 524 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 IL32P24001 234 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 ADSLP30566 484 aaPredicted RBP14.06□□□□□ -0.16
COX6A1-203ENST00000550009 LTBQ06643 244 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 BSPH1Q075Z2 132 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 SPOCK1Q08629 439 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 BNIP2Q12982 314 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 ITGADQ13349 1161 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 STK11Q15831 433 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 DPY19L1Q2PZI1 675 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 PDCD4Q53EL6 469 aaKnown RBP14.06□□□□□ -0.16
COX6A1-203ENST00000550009 NCMAPQ5T1S8 102 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 SHEQ5VZ18 495 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 ADAM5Q6NVV9 412 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 ZNF836Q6ZNA1 936 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 LRRC34Q8IZ02 419 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 SLC43A2Q8N370 569 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 CLIP4Q8N3C7 705 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 STEAP2Q8NFT2 490 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 KISS1RQ969F8 398 aaPredicted RBP14.06□□□□□ -0.16
COX6A1-203ENST00000550009 PIGTQ969N2 578 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 TRNT1Q96Q11 434 aaKnown RBP14.06□□□□□ -0.16
COX6A1-203ENST00000550009 SLCO1B3Q9NPD5 702 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 POLE3Q9NRF9 147 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 LAMP3Q9UQV4 416 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 TMED7Q9Y3B3 224 aa14.06□□□□□ -0.16
COX6A1-203ENST00000550009 TRPC5OSA6NMA1 111 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 RFXANKO14593 260 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 NDUFS7O75251 213 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 SLC22A3O75751 556 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 AGR2O95994 175 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 GUSBP08236 651 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 FOSL1P15407 271 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 FPR1P21462 350 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 TACR3P29371 465 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 APOBEC1P41238 236 aaKnown RBP14.05□□□□□ -0.16
COX6A1-203ENST00000550009 ACAA2P42765 397 aaKnown RBP14.05□□□□□ -0.16
COX6A1-203ENST00000550009 OR2B6P58173 313 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 HOXC5Q00444 222 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 EPS8Q12929 822 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 C9orf135Q5VTT2 229 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 SLC2A7Q6PXP3 512 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 CLEC9AQ6UXN8 241 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 C20orf204Q6ZNR8 217 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 LRRC74BQ6ZQY2 392 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 Q6ZT83 130 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 GRINAQ7Z429 371 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 MTDHQ86UE4 582 aaKnown RBP14.05□□□□□ -0.16
COX6A1-203ENST00000550009 ZNF433Q8N7K0 673 aaPredicted RBP14.05□□□□□ -0.16
COX6A1-203ENST00000550009 MAPK1IP1LQ8NDC0 245 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 OR52E4Q8NGH9 312 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 WDR60Q8WVS4 1066 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 TMEM234Q8WY98 164 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 COX4I2Q96KJ9 171 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 EBF4Q9BQW3 602 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 EXOSC3Q9NQT5 275 aaKnown RBP14.05□□□□□ -0.16
COX6A1-203ENST00000550009 SERINC1Q9NRX5 453 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 CHD3Q12873 2000 aaKnown RBP14.05□□□□□ -0.16
COX6A1-203ENST00000550009 ARFGEF3Q5TH69 2177 aa14.05□□□□□ -0.16
COX6A1-203ENST00000550009 ZNF724A8MTY0 619 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 FRS3O43559 492 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 RAD51DO75771 328 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 BCHEP06276 602 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 HOXB9P17482 250 aaPredicted RBP14.04□□□□□ -0.16
COX6A1-203ENST00000550009 CDKN1AP38936 164 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 HPCAP84074 193 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 LGALS3BPQ08380 585 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 PGGHGQ32M88 737 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 ATG16L1Q676U5 607 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 COMTD1Q86VU5 262 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 LRRC75A-AS1Q8N1F1 130 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 PIWIL2Q8TC59 973 aaKnown RBP14.04□□□□□ -0.16
COX6A1-203ENST00000550009 SLC38A5Q8WUX1 472 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 MAL2Q969L2 176 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 ZBTB18Q99592 522 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 C1QTNF6Q9BXI9 259 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 PAIP1Q9H074 479 aaKnown RBP14.04□□□□□ -0.16
COX6A1-203ENST00000550009 OR10A4Q9H209 315 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 GP6Q9HCN6 339 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 SDR39U1Q9NRG7 319 aaPredicted RBP14.04□□□□□ -0.16
COX6A1-203ENST00000550009 NKIRAS1Q9NYS0 192 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 SLAMF8Q9P0V8 285 aa14.04□□□□□ -0.16
COX6A1-203ENST00000550009 MAGED1Q9Y5V3 778 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms