RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 TEKQ02763 1124 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 EMX1Q04741 257 aaPredicted RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 CBFBQ13951 182 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 ELOA3BQ3SY89 546 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 FCRLBQ6BAA4 426 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 XAF1Q6GPH4 301 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 NUP54Q7Z3B4 507 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 ATG4DQ86TL0 474 aaPredicted RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 OAFQ86UD1 273 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 ESX1Q8N693 406 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 ELOA3Q8NG57 546 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 OR2T33Q8NG76 320 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 OR4Q3Q8NH05 313 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 SNRNP27Q8WVK2 155 aaKnown RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 Q96MT0 163 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 COPS4Q9BT78 406 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 POLDIP3Q9BY77 421 aaKnown RBP10.05□□□□□ -0.8
SCG3-202ENST00000542355 ENKD1Q9H0I2 346 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 VCX3AQ9NNX9 186 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 GPR83Q9NYM4 423 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 DNAJC27Q9NZQ0 273 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 GPR52Q9Y2T5 361 aa10.05□□□□□ -0.8
SCG3-202ENST00000542355 SH3D21A4FU49 640 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 ADAM10O14672 748 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 PNMTP11086 282 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 PGCP20142 388 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 CCNA2P20248 432 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 F8A1P23610 371 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 TACR3P29371 465 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 C21orf33P30042 268 aaPredicted RBP10.04□□□□□ -0.8
SCG3-202ENST00000542355 DLSTP36957 453 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 TMED10P49755 219 aaKnown RBP10.04□□□□□ -0.8
SCG3-202ENST00000542355 P2RX1P51575 399 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 FXYD6P3P58550 94 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 EFNB1P98172 346 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 MVKQ03426 396 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 BICRALQ6AI39 1079 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 CFAP161Q6P656 301 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 POMZP3Q6PJE2 187 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 PPP1R32Q7Z5V6 425 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 GPR141Q7Z602 305 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 CLDN22Q8N7P3 220 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 NLGN4YQ8NFZ3 816 aaPredicted RBP10.04□□□□□ -0.8
SCG3-202ENST00000542355 OR10G3Q8NGC4 313 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 B4GALNT2Q8NHY0 566 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 FANK1Q8TC84 345 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 TTC9Q92623 222 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 DGCR14Q96DF8 476 aaKnown RBP10.04□□□□□ -0.8
SCG3-202ENST00000542355 RHOVQ96L33 236 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 LRR1Q96L50 414 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 SLC38A2Q96QD8 506 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 TNFRSF13CQ96RJ3 184 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 CENPOQ9BU64 300 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 ADAM19Q9H013 955 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 CCNB1IP1Q9NPC3 277 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 SIGLEC7Q9Y286 467 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 MAN1A2O60476 641 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 FOXD2O60548 495 aaPredicted RBP10.04□□□□□ -0.8
SCG3-202ENST00000542355 PTP4A3O75365 173 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 RCBTB2O95199 551 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 MT-ND2P03891 347 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 PCMT1P22061 227 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 MAP2K4P45985 399 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 C17orf67Q0P5P2 114 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 RAB39AQ14964 217 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 COL28A1Q2UY09 1125 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 PGGHGQ32M88 737 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 ZBED5Q49AG3 693 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 SMARCD3Q6STE5 483 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 THSD4Q6ZMP0 1018 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 PRSS48Q7RTY5 328 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 MRGPREQ86SM8 312 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 MISPQ8IVT2 679 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 FAM26EQ8N5C1 309 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 LRRC17Q8N6Y2 441 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 OR52L1Q8NGH7 329 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 BRIX1Q8TDN6 353 aaKnown RBP10.04□□□□□ -0.8
SCG3-202ENST00000542355 MYDGFQ969H8 173 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 SGTBQ96EQ0 304 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 TEX12Q9BXU0 123 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 UBQLN3Q9H347 655 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 CDCP1Q9H5V8 836 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 HHATLQ9HCP6 504 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 KLRF1Q9NZS2 232 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 CEPT1Q9Y6K0 416 aa10.04□□□□□ -0.8
SCG3-202ENST00000542355 IGKV1D-42A0A075B6H8 117 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 CDC40O60508 579 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCG3-202ENST00000542355 HCN1O60741 890 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 WISP1O95388 367 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 STSP08842 583 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 JUNBP17275 347 aaPredicted RBP10.03□□□□□ -0.8
SCG3-202ENST00000542355 SOX3P41225 446 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 ST3GAL4Q11206 333 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 DNASE1L3Q13609 305 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 QPRTQ15274 297 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 NTRK2Q16620 822 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 IL20RBQ6UXL0 311 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 STX19Q8N4C7 294 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 GPR119Q8TDV5 335 aa10.03□□□□□ -0.8
SCG3-202ENST00000542355 SPACA9Q96E40 222 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms