RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 DNAJA3Q96EY1 480 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 NSMCE3Q96MG7 304 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 AMDHD1Q96NU7 426 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 CCNL2Q96S94 520 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-217ENST00000541578 LZTS2Q9BRK4 669 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 TTYH2Q9BSA4 534 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 TSSK1BQ9BXA7 367 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 DUSP16Q9BY84 665 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 UPF3BQ9BZI7 483 aaKnown RBP3.48□□□□□ -1.85
SNHG1-217ENST00000541578 TRIM9Q9C026 710 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 GFRA4Q9GZZ7 299 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 PCSK1NQ9UHG2 260 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 ANAPC7Q9UJX3 599 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 BARX2Q9UMQ3 279 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-217ENST00000541578 NPIPA1Q9UND3 350 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 PIGLQ9Y2B2 252 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 TMED5Q9Y3A6 229 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 RNF115Q9Y4L5 304 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 GMPPBQ9Y5P6 360 aa3.48□□□□□ -1.85
SNHG1-217ENST00000541578 MROH5Q6ZUA9 1318 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 FRMPD3Q5JV73 1810 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 IGHV3-38A0A0C4DH36 116 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 GOLGA8OA6NCC3 632 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 GOLGA8NF8WBI6 632 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 MED7O43513 233 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 TYROBPO43914 113 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 TRIM3O75382 744 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 POP4O95707 220 aaKnown RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 TROVE2P10155 538 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 SLC2A3P11169 496 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 ZNF26P17031 533 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 RPL4P36578 427 aaKnown RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 SUCLG1P53597 346 aaKnown RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 NDUFV3P56181 108 aaKnown RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 RPS6P62753 249 aaKnown RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 GNB1P62873 340 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 PLD1Q13393 1074 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 WDR43Q15061 677 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 ZNF146Q15072 292 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 DCST2Q5T1A1 773 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 PRAMEF5Q5TYX0 476 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 PRAMEF6Q5VXH4 476 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 ADAMTSL5Q6ZMM2 481 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 GDPGP1Q6ZNW5 385 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 NLRP9Q7RTR0 991 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 FAM228AQ86W67 206 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 IFNEQ86WN2 208 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 CCDC71Q8IV32 467 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 IQCF2Q8IXL9 164 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 DHRSXQ8N5I4 330 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 AQP11Q8NBQ7 271 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 NANPQ8TBE9 248 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 IL1F10Q8WWZ1 152 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 ZNF396Q96N95 335 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-217ENST00000541578 COPS8Q99627 209 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 METTL7AQ9H8H3 244 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 RAB18Q9NP72 206 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 CACNG5Q9UF02 275 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 PYGO1Q9Y3Y4 419 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 CDK5RAP2Q96SN8 1893 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 TRANK1O15050 2925 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 PHIPQ8WWQ0 1821 aa3.47□□□□□ -1.85
SNHG1-217ENST00000541578 DOCK1Q14185 1865 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 IGHV4-30-2A0A087WSY4 118 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 TRBV5-4A0A0C4DH59 114 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 A0A0U1RQS6 177 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 ESYT2A0FGR8 921 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 G3V2L1 256 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 H0YC42 278 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 DUS4LO95620 317 aaKnown RBP3.46□□□□□ -1.86
SNHG1-217ENST00000541578 TIMP1P01033 207 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 JCHAINP01591 159 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 OPN1LWP04000 364 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 H2BFMP0C1H6 154 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 CCDC159P0C7I6 412 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 UQCRFS1P1P0C7P4 283 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF883P0CG24 379 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 PGCP20142 388 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 LAP3P28838 519 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 ARHGDIAP52565 204 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 CDH4P55283 916 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 TCP10Q12799 353 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 MXD4Q14582 209 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-217ENST00000541578 NECTIN1Q15223 517 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 PPP1R7Q15435 360 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 ZIC1Q15915 447 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 ZSCAN26Q16670 478 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 GGTA1PQ4G0N0 100 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 WDR25Q64LD2 544 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-217ENST00000541578 APOBEC3HQ6NTF7 200 aaKnown RBP3.46□□□□□ -1.86
SNHG1-217ENST00000541578 C16orf87Q6PH81 154 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 TRPM8Q7Z2W7 1104 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 LRRC75A-AS1Q8N1F1 130 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF614Q8N883 585 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 CEP112Q8N8E3 955 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 FAM184AQ8NB25 1140 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 OR10A7Q8NGE5 316 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 OR9K2Q8NGE7 335 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 SLC2A14Q8TDB8 520 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms