RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 CLCA1A8K7I4 914 aa22.33■■□□□ 1.17
TTC3-225ENST00000540756 MASP1P48740 699 aa22.33■■□□□ 1.17
TTC3-225ENST00000540756 RAB39AQ14964 217 aa22.33■■□□□ 1.17
TTC3-225ENST00000540756 PGGHGQ32M88 737 aa22.33■■□□□ 1.17
TTC3-225ENST00000540756 CLDN22Q8N7P3 220 aa22.33■■□□□ 1.17
TTC3-225ENST00000540756 TRUB1Q8WWH5 349 aaKnown RBP22.33■■□□□ 1.17
TTC3-225ENST00000540756 LRR1Q96L50 414 aa22.33■■□□□ 1.17
TTC3-225ENST00000540756 SIGLEC11Q96RL6 698 aa22.33■■□□□ 1.17
TTC3-225ENST00000540756 FKBP14Q9NWM8 211 aa22.33■■□□□ 1.17
TTC3-225ENST00000540756 CNTRLQ7Z7A1 2325 aa22.33■■□□□ 1.17
TTC3-225ENST00000540756 RGS10O43665 173 aa22.33■■□□□ 1.16
TTC3-225ENST00000540756 PNMTP11086 282 aa22.33■■□□□ 1.16
TTC3-225ENST00000540756 PGCP20142 388 aa22.33■■□□□ 1.16
TTC3-225ENST00000540756 TMED10P49755 219 aaKnown RBP22.33■■□□□ 1.16
TTC3-225ENST00000540756 SYT14P1Q58G82 188 aa22.33■■□□□ 1.16
TTC3-225ENST00000540756 SLC46A3Q7Z3Q1 461 aa22.33■■□□□ 1.16
TTC3-225ENST00000540756 OR2T33Q8NG76 320 aa22.33■■□□□ 1.16
TTC3-225ENST00000540756 SGTBQ96EQ0 304 aa22.33■■□□□ 1.16
TTC3-225ENST00000540756 METTL7AQ9H8H3 244 aa22.33■■□□□ 1.16
TTC3-225ENST00000540756 CHCHD2Q9Y6H1 151 aaPredicted RBP22.33■■□□□ 1.16
TTC3-225ENST00000540756 DCHS1Q96JQ0 3298 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 STMND1H3BQB6 276 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 SURF4O15260 269 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 STSP08842 583 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 TEKQ02763 1124 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 SLC35F1Q5T1Q4 408 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 ZNF468Q5VIY5 522 aaPredicted RBP22.32■■□□□ 1.16
TTC3-225ENST00000540756 B3GNTL1Q67FW5 361 aaPredicted RBP22.32■■□□□ 1.16
TTC3-225ENST00000540756 SMARCD3Q6STE5 483 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 RPS19BP1Q86WX3 136 aaKnown RBP22.32■■□□□ 1.16
TTC3-225ENST00000540756 FAM26EQ8N5C1 309 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 KTI12Q96EK9 354 aaPredicted RBP22.32■■□□□ 1.16
TTC3-225ENST00000540756 MOGAT1Q96PD6 335 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 FAM192AQ9GZU8 254 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 SNX5Q9Y5X3 404 aa22.32■■□□□ 1.16
TTC3-225ENST00000540756 BHLHE40O14503 412 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 TM4SF5O14894 197 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 FOXD2O60548 495 aaPredicted RBP22.31■■□□□ 1.16
TTC3-225ENST00000540756 FADS2O95864 444 aaKnown RBP22.31■■□□□ 1.16
TTC3-225ENST00000540756 CASP3P42574 277 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 CSNK2BP67870 215 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 C17orf67Q0P5P2 114 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 TGIF1Q15583 401 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 TMEM201Q5SNT2 666 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 PRAMEF20Q5VT98 475 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 C1QL3Q5VWW1 255 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 ARSKQ6UWY0 536 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 SIRT6Q8N6T7 355 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 GPR87Q9BY21 358 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 CEPT1Q9Y6K0 416 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 LOC400499M0QZD8 3231 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 ZC3H12DA2A288 527 aaKnown RBP22.31■■□□□ 1.16
TTC3-225ENST00000540756 C21orf140B9A014 251 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 INMTO95050 263 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 ENDOUP21128 410 aaKnown RBP22.31■■□□□ 1.16
TTC3-225ENST00000540756 LTBQ06643 244 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 ZBED5Q49AG3 693 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 IGFN1Q86VF2 1251 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 SLC15A4Q8N697 577 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 TMEM163Q8TC26 289 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 IPCEF1Q8WWN9 437 aaPredicted RBP22.31■■□□□ 1.16
TTC3-225ENST00000540756 ZNF582Q96NG8 517 aaPredicted RBP22.31■■□□□ 1.16
TTC3-225ENST00000540756 LHPPQ9H008 270 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 TAS2R16Q9NYV7 291 aa22.31■■□□□ 1.16
TTC3-225ENST00000540756 YARS2Q9Y2Z4 477 aaKnown RBP22.31■■□□□ 1.16
TTC3-225ENST00000540756 SMIM31A0A1B0GVY4 71 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 SH3D21A4FU49 640 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 HPP00738 406 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 GP1BBP13224 206 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 BMP7P18075 431 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 MLF1P58340 268 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 ST3GAL4Q11206 333 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 ATP1A4Q13733 1029 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 CCDC81Q6ZN84 652 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 TMPRSS12Q86WS5 348 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 MISPQ8IVT2 679 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 NKD1Q969G9 470 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 IFT27Q9BW83 186 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 IRF2BPLQ9H1B7 796 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 ANKRD10Q9NXR5 420 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 TAS2R10Q9NYW0 307 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 CFAP47Q6ZTR5 3102 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 HCN1O60741 890 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 RCBTB2O95199 551 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 SLC9A3P48764 834 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 OCLNQ16625 522 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 GTF2IRD2BQ6EKJ0 949 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 PRSS48Q7RTY5 328 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 GPR141Q7Z602 305 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 GTF2IRD2Q86UP8 949 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 OR52L1Q8NGH7 329 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 FAR1Q8WVX9 515 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 SLC38A2Q96QD8 506 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 TMEM43Q9BTV4 400 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 VDAC3Q9Y277 283 aa22.3■■□□□ 1.16
TTC3-225ENST00000540756 MED13Q9UHV7 2174 aa22.29■■□□□ 1.16
TTC3-225ENST00000540756 MED12Q93074 2177 aa22.29■■□□□ 1.16
TTC3-225ENST00000540756 CCDC160A6NGH7 325 aa22.29■■□□□ 1.16
TTC3-225ENST00000540756 FAM183AA6NL82 134 aa22.29■■□□□ 1.16
TTC3-225ENST00000540756 SHISA8B8ZZ34 492 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms