RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	SULT2B1	O00204	365 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	KLF11	O14901	512 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ZNF208	O43345	1280 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CYP7B1	O75881	506 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	FES	P07332	822 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	THBS1	P07996	1170 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CHRM4	P08173	479 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	IDO1	P14902	403 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	NTF4	P34130	210 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ANXA11	P50995	505 aa	Known RBP	11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TSC22D1	Q15714	1073 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	GSTA3	Q16772	222 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	GPAT3	Q53EU6	434 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ATG16L1	Q676U5	607 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MSANTD1	Q6ZTZ1	278 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	YTHDF3	Q7Z739	585 aa	Known RBP	11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	GALNT5	Q7Z7M9	940 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	P2RY8	Q86VZ1	359 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CIART	Q8N365	385 aa	Predicted RBP	11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ARFGAP2	Q8N6H7	521 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CNOT9	Q92600	299 aa	Known RBP	11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ARL5B	Q96KC2	179 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ZNF300	Q96RE9	604 aa	Predicted RBP	11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SMR3A	Q99954	134 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PAIP2	Q9BPZ3	127 aa	Known RBP	11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	BDH2	Q9BUT1	245 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	POTEKP	Q9BYX7	375 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ADAM19	Q9H013	955 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ESRP2	Q9H6T0	727 aa	Known RBP	11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MANSC1	Q9H8J5	431 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TMBIM4	Q9HC24	238 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ZIM2	Q9NZV7	527 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PRSS50	Q9UI38	385 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	DSPP	Q9NZW4	1301 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	DNHD1	Q96M86	4753 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	KRT75	O95678	551 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	HEXA	P06865	529 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	DBI	P07108	87 aa	Known RBP	11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	DANCR	P0C864	163 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	IGHV1-2	P23083	117 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	IL32	P24001	234 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	IDH2	P48735	452 aa	Known RBP	11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MRPL19	P49406	292 aa	Known RBP	11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	NME5	P56597	212 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CAPRIN1	Q14444	709 aa	Known RBP	11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	COX20	Q5RI15	118 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TIMM23B	Q5SRD1	257 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ZNF621	Q6ZSS3	439 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MAVS	Q7Z434	540 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ANKRD42	Q8N9B4	389 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ZNF563	Q8TA94	476 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TMEM171	Q8WVE6	324 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475		Q96MF0	132 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	GRIP2	Q9C0E4	1043 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SLC6A13	Q9NSD5	602 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TMEM181	Q9P2C4	612 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	RNF115	Q9Y4L5	304 aa		11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	HEATR1	Q9H583	2144 aa	Known RBP	11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	FN1	P02751	2386 aa	Known RBP	11.59	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PLCE1	Q9P212	2302 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	DPRX	A6NFQ7	191 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475		C9JVG2	144 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	RFXANK	O14593	260 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	AP3D1	O14617	1153 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	SLC22A3	O75751	556 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	GSN	P06396	782 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	TFPT	P0C1Z6	253 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	ADSL	P30566	484 aa	Predicted RBP	11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	SLC1A3	P43003	542 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	MAGOH	P61326	146 aa	Known RBP	11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	HPCA	P84074	193 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	LTB	Q06643	244 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	EPS8	Q12929	822 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	SLC9B1	Q4ZJI4	515 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	FBXW9	Q5XUX1	488 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	PIGX	Q8TBF5	258 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	WDR60	Q8WVS4	1066 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	PERP	Q96FX8	193 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	ZBTB18	Q99592	522 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	CXorf56	Q9H5V9	222 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	EMC3	Q9P0I2	261 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	OSGIN1	Q9UJX0	560 aa		11.58	□□□□□ -0.56
SEMA4D-223	ENST00000540475	TLN2	Q9Y4G6	2542 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	CDHR4	A6H8M9	788 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	OR5H1	A6NKK0	313 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	PDLIM1	O00151	329 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	GPR171	O14626	319 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	EIF1B	O60739	113 aa	Known RBP	11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	LY6G6D	O95868	133 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	CD3E	P07766	207 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	IMPDH2	P12268	514 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	RYK	P34925	604 aa		11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	ACAA2	P42765	397 aa	Known RBP	11.57	□□□□□ -0.56
SEMA4D-223	ENST00000540475	POLR2H	P52434	150 aa	Known RBP	11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms