RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 CSTAP01040 98 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 DDX5P17844 614 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 PGCP20142 388 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 SOAT1P35610 550 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 SNRPD2P62316 118 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 PDK3Q15120 406 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 MST1LQ2TV78 715 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 SLC46A3Q7Z3Q1 461 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 PIGXQ8TBF5 258 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 MZB1Q8WU39 189 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 TMEM234Q8WY98 164 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 OR5P2Q8WZ92 322 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 ARL5BQ96KC2 179 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 SDF2Q99470 211 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 OR11A1Q9GZK7 315 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 LAT2Q9GZY6 243 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 SLC17A5Q9NRA2 495 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 CTPS2Q9NRF8 586 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 ATP6V1HQ9UI12 483 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 KCNE5Q9UJ90 142 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 AMDHD2Q9Y303 409 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 TMED5Q9Y3A6 229 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 LOC390937A0A1W2PQ73 354 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 LRP5LA4QPB2 252 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 TMEM233B4DJY2 109 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 CFLARO15519 480 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 RIPK2O43353 540 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 PLIN3O60664 434 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 FCMRO60667 390 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 DNAJA2O60884 412 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 DYSFO75923 2080 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 CHEK2O96017 543 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 CPA3P15088 417 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 ITGA2P17301 1181 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 CDH2P19022 906 aaPredicted RBP12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 PTGR1Q14914 329 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 SWI5Q1ZZU3 235 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 KANK2Q63ZY3 851 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 ZNF563Q8TA94 476 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 BPESC1Q9GZL8 116 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 NMUR2Q9GZQ4 415 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 SLC7A10Q9NS82 523 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 ACER3Q9NUN7 267 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 OXSMQ9NWU1 459 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 UPB1Q9UBR1 384 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 CHRNA9Q9UGM1 479 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 MKLN1Q9UL63 735 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 DNAJC15Q9Y5T4 150 aa12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 SPIN1Q9Y657 262 aaPredicted RBP12.24□□□□□ -0.45
SMARCA4-206ENST00000538456 TMEM114B3SHH9 223 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 PDLIM1O00151 329 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 KLF11O14901 512 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 BCAS1O75363 584 aaPredicted RBP12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 UGT2B17O75795 530 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 PMS2P2O95744 297 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 ZNF23P17027 643 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 CCNA2P20248 432 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 RYKP34925 604 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 RPL3P39023 403 aaKnown RBP12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 MAGEA8P43361 318 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 SLC16A1P53985 500 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 OR2B6P58173 313 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 ZNF141Q15928 474 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 CCDC153Q494R4 210 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 KLHL24Q6TFL4 600 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 EIF3MQ7L2H7 374 aaKnown RBP12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 SPATA19Q7Z5L4 167 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 CLEC4FQ8N1N0 589 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 C17orf78Q8N4C9 275 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 RFLNBQ8N5W9 214 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 MNS1Q8NEH6 495 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 PSMA8Q8TAA3 256 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 SFXN5Q8TD22 340 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 C1orf50Q9BV19 199 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 CCDC106Q9BWC9 280 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 PLA2G12AQ9BZM1 189 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 SERHL2Q9H4I8 314 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 DCTN4Q9UJW0 460 aa12.23□□□□□ -0.45
SMARCA4-206ENST00000538456 PIP5K1BO14986 540 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 STX11O75558 287 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 SRP14P37108 136 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 APOBEC1P41238 236 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 PRPS1P60891 318 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 TGFBR3Q03167 851 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 LSM12Q3MHD2 195 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 HIKESHIQ53FT3 197 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 TSPO2Q5TGU0 170 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 C12orf54Q6X4T0 127 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 RNF165Q6ZSG1 346 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 TRMT10CQ7L0Y3 403 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 C16orf62Q7Z3J2 963 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 MEX3DQ86XN8 651 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 C10orf107Q8IVU9 208 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 KRTCAP2Q8N6L1 136 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 C1orf162Q8NEQ5 155 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 AGR3Q8TD06 166 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 TWIST2Q8WVJ9 160 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 MOAP1Q96BY2 351 aa12.22□□□□□ -0.45
SMARCA4-206ENST00000538456 MYOZ1Q9NP98 299 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms