RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PTGES2Q9H7Z7 377 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TUBA4BQ9H853 241 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 ZFAND3Q9H8U3 227 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TMEM138Q9NPI0 162 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TREX1Q9NSU2 369 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MRPL22Q9NWU5 206 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 FTSJ1Q9UET6 329 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 OPN4Q9UHM6 478 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 EXOGQ9Y2C4 368 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 AAR2Q9Y312 384 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 MRPL11Q9Y3B7 192 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 TRBV5-3A0A0A0MS03 114 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TMEM272A0A1B0GTI8 110 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 ZNF705GA8MUZ8 300 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 PYCARD-AS1I3L0S3 204 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 GFYI3L273 518 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 OR7A17O14581 309 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 EIF4E2O60573 245 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 TMEM127O75204 238 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 GPR32O75388 356 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 HLA-DQB2P05538 268 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 BCKDHAP12694 445 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H1BP16401 226 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 CPEP16870 476 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 LMO2P25791 158 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 S100A2P29034 98 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SLC6A4P31645 630 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 THBS2P35442 1172 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 HCCSP53701 268 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 STARD6P59095 220 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 DAOAP59103 153 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TPI1P60174 286 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MRPS11P82912 194 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 TWF1Q12792 350 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CNTN1Q12860 1018 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MAD2L1Q13257 205 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 KIAA0141Q14154 515 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 CPSF6Q16630 551 aaKnown RBP eCLIP3.45□□□□□ -1.86
MCF2-210ENST00000536274 DUSP28Q4G0W2 176 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 INTS6LQ5JSJ4 861 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 NCR3LG1Q68D85 454 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TCEAL6Q6IPX3 200 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 KIAA1161Q6NSJ0 714 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 LPCAT3Q6P1A2 487 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 Q6ZVH6 145 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MOB3CQ70IA8 216 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 C16orf59Q7L2K0 433 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RABEPKQ7Z6M1 372 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TAC4Q86UU9 113 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CNTN4Q8IWV2 1026 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 C4orf19Q8IY42 314 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 ZNF321PQ8N8H1 164 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 OR5M3Q8NGP4 307 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TMEM174Q8WUU8 243 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TRAPPC12Q8WVT3 735 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 EAF1Q96JC9 268 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 PANX1Q96RD7 426 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MAPKAP1Q9BPZ7 522 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 ACBD6Q9BR61 282 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SLC38A1Q9H2H9 487 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 FN3KRPQ9HA64 309 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 ISYNA1Q9NPH2 558 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 KRCC1Q9NPI7 259 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 ASCL3Q9NQ33 180 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 PRDM7Q9NQW5 492 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 UQCC1Q9NVA1 299 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 PTGFRNQ9P2B2 879 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RNF24Q9Y225 148 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SLC22A14Q9Y267 594 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SLC27A6Q9Y2P4 619 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 GSTK1Q9Y2Q3 226 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 URGCP-MRPS24S4R325 110 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CKAP5Q14008 2032 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TRAV14DV4A0A0A6YYC5 116 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF727A8MUV8 499 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 M0R036 132 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TSPAN6O43657 245 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 BCHEP06276 602 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 SFTA3P0C7M3 94 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 RCC1P18754 421 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 HNF1AP20823 631 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 IGFBP6P24592 240 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 MAPK3P27361 379 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 OR1E1P30953 314 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 CALCRP30988 508 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 S100A3P33764 101 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 NSG1P42857 185 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 RPS10P46783 165 aaKnown RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF84P51523 738 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 DCAF7P61962 342 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 SNRPFP62306 86 aaKnown RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 RPS15P62841 145 aaKnown RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 NHLH2Q02577 135 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ADIGQ0VDE8 80 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 CAPSQ13938 189 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TEAD2Q15562 447 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 DUSP5Q16690 384 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 KHDC3LQ587J8 217 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TEX30Q5JUR7 227 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 CLEC12AQ5QGZ9 265 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms