RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 OIP5O43482 229 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 CDC40O60508 579 aaKnown RBP eCLIP9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 ITGA10O75578 1167 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 OR2J2O76002 312 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 LINGO3P0C6S8 592 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 PNMTP11086 282 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 PGCP20142 388 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 CHMP24386 653 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 EPHA2P29317 976 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 RNF144AP50876 292 aaPredicted RBP9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 GAS1P54826 345 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 TPD52P55327 224 aaPredicted RBP9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 FBXW4P57775 412 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 CD47Q08722 323 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 C17orf67Q0P5P2 114 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 SNTA1Q13424 505 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 TOP3AQ13472 1001 aaPredicted RBP9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 APOFQ13790 326 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 CBFBQ13951 182 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 NDUFAF6Q330K2 333 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 ZNF791Q3KP31 576 aaPredicted RBP9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 RBM48Q5RL73 367 aaKnown RBP9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 SLX4IPQ5VYV7 408 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 DESI1Q6ICB0 168 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 RPL13AP3Q6NVV1 102 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 CBLN3Q6UW01 205 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 C16orf47Q6ZP98 133 aaPredicted RBP9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 TMPRSS11FQ6ZWK6 438 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 SLC43A2Q8N370 569 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 GATSQ8NAP1 163 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 OR5W2Q8NH69 310 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 CPT1CQ8TCG5 803 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 TMEM255BQ8WV15 326 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 HDAC2Q92769 488 aaKnown RBP9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 NTNG2Q96CW9 530 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 RTN4RQ9BZR6 473 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 LIN28AQ9H9Z2 209 aaKnown RBP9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 SLC25A19Q9HC21 320 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 ABI3Q9P2A4 366 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 CARD8Q9Y2G2 431 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 MED31Q9Y3C7 131 aa9.16□□□□□ -0.94
LDLRAD3-206ENST00000534091 TRIM64CA6NLI5 447 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 ETV2O00321 342 aaPredicted RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 TP53I11O14683 189 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 HCRTR2O43614 444 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 MPZL2O60487 215 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 CELA2AP08217 269 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 CCDC159P0C7I6 412 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 SMIM18P0DKX4 95 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 POU2F1P14859 743 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 MSX1P28360 303 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 PTGDSP41222 190 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 SLC1A3P43003 542 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 SSR4P51571 173 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 GABARAPL2P60520 117 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 TUBA4AP68366 448 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 LSM11P83369 360 aaKnown RBP eCLIP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 Q0VFX4 171 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 MAD2L1BPQ15013 274 aaPredicted RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 PTGES3Q15185 160 aaKnown RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 INPP5JQ15735 1006 aaPredicted RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 NADK2Q4G0N4 442 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 C6orf141Q5SZD1 244 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 C12orf73Q69YU5 71 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 TTC33Q6PID6 262 aaPredicted RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 MARCH3Q86UD3 253 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 RPS19BP1Q86WX3 136 aaKnown RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 CCDC71Q8IV32 467 aaPredicted RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 GPALPP1Q8IXQ4 340 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 CADM2Q8N3J6 435 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 TMCO5AQ8N6Q1 288 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 AMER2Q8N7J2 671 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 Q8NA96 180 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 B4GALNT2Q8NHY0 566 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 THAP3Q8WTV1 239 aaPredicted RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 TRUB1Q8WWH5 349 aaKnown RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 PSMF1Q92530 271 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 FAM46AQ96IP4 442 aaKnown RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 FRMD6Q96NE9 622 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 GPA33Q99795 319 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 TMEM43Q9BTV4 400 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 MRPS26Q9BYN8 205 aaKnown RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 ADAM19Q9H013 955 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 SH2D2AQ9NP31 389 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 BATF3Q9NR55 127 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 SDHAF3Q9NRP4 125 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 TUBA8Q9NY65 449 aaPredicted RBP9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 IL20Q9NYY1 176 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 BLOC1S6Q9UL45 172 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 CDH10Q9Y6N8 788 aa9.15□□□□□ -0.94
LDLRAD3-206ENST00000534091 CFAP46Q8IYW2 2715 aa9.15□□□□□ -0.95
LDLRAD3-206ENST00000534091 TRAV17A0A0B4J275 112 aa9.14□□□□□ -0.95
LDLRAD3-206ENST00000534091 ANKUB1A6NFN9 424 aa9.14□□□□□ -0.95
LDLRAD3-206ENST00000534091 SCO2O43819 266 aa9.14□□□□□ -0.95
LDLRAD3-206ENST00000534091 PIP5K1CO60331 668 aa9.14□□□□□ -0.95
LDLRAD3-206ENST00000534091 IFI30P13284 250 aa9.14□□□□□ -0.95
LDLRAD3-206ENST00000534091 GABRB1P18505 474 aa9.14□□□□□ -0.95
LDLRAD3-206ENST00000534091 MST1P26927 711 aa9.14□□□□□ -0.95
LDLRAD3-206ENST00000534091 SOX3P41225 446 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms