RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 OR6X1Q8NH79 312 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 RDH11Q8TC12 318 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 GPR151Q8TDV0 419 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 DNAJB3Q8WWF6 145 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 SLC35C1Q96A29 364 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 CELF6Q96J87 481 aaKnown RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 RNF170Q96K19 258 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 FAM84BQ96KN1 310 aaPredicted RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 XPO6Q96QU8 1125 aaKnown RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 TM2D2Q9BX73 214 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 NEUROG2Q9H2A3 272 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 SYT4Q9H2B2 425 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 C12orf10Q9HB07 376 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 NMRAL1Q9HBL8 299 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ZC4H2Q9NQZ6 224 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 SIRT7Q9NRC8 400 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 FGF21Q9NSA1 209 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 TAS2R9Q9NYW1 312 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 FLRT3Q9NZU0 649 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ZNF319Q9P2F9 582 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 GHRLQ9UBU3 117 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 TINAGQ9UJW2 476 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ANAPC7Q9UJX3 599 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 POMT2Q9UKY4 750 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 USP47Q96K76 1375 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 NKTRP30414 1462 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 PTPRCP08575 1304 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 A0A1B0GUS0 222 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 TCRBV5S1A1TA0A578 114 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 GOLGA6L10A6NI86 522 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 CENPXA8MT69 81 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 TMEM114B3SHH9 223 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 C2CD4DB7Z1M9 353 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 CLDN34H7C241 214 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 M0QXV9 152 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 SIRPB1O00241 398 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RNASET2O00584 256 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 GAPDHSO14556 408 aaPredicted RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 TFECO14948 347 aaPredicted RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 MLNRO43193 412 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 SLC19A2O60779 497 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 HSBP1O75506 76 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RFPL2O75678 378 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 KRT33AO76009 404 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 DIRAS1O95057 198 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 NXPH2O95156 264 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 LRATO95237 230 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 DEXIO95424 95 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 LDOC1O95751 146 aaPredicted RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 LATS1O95835 1130 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 HLA-HP01893 362 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 IFNW1P05000 195 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 ATP1A1P05023 1023 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 CTRB1P17538 263 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RAB4AP20338 218 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 IMPDH1P20839 514 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 CA4P22748 312 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 GLRA1P23415 457 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 G0S2P27469 103 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RPS19P39019 145 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 LIMS1P48059 325 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RIPK4P57078 832 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 CXCR4P61073 352 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 ISL1P61371 349 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RPS4XP62701 263 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 PITX1P78337 314 aaPredicted RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 CX3CL1P78423 397 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 CDKL1Q00532 357 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 ST3GAL1Q11201 340 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 EZH2Q15910 746 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 ZNF74Q16587 644 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 NDUFAF6Q330K2 333 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 MS4A18Q3C1V0 323 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 PIGGQ5H8A4 983 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 AARS2Q5JTZ9 985 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 SAMD4BQ5PRF9 694 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 CTRB2Q6GPI1 263 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 APOBEC3HQ6NTF7 200 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 METTL7BQ6UX53 244 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 FCRLAQ7L513 359 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 SHFQ7M4L6 423 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 C5orf24Q7Z6I8 188 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 TMEM156Q8N614 296 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 DMBX1Q8NFW5 382 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 OR8K1Q8NGG5 319 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 OR5R1Q8NH85 324 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 DTD1Q8TEA8 209 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RNF133Q8WVZ7 376 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RND1Q92730 232 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 MYDGFQ969H8 173 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 C18orf25Q96B23 403 aaPredicted RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 ZFP3Q96NJ6 502 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 ERGIC2Q96RQ1 377 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 CIB1Q99828 191 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 SLC6A7Q99884 636 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 APOL2Q9BQE5 337 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 NICN1Q9BSH3 213 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RSG1Q9BU20 258 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RPP25Q9BUL9 199 aaKnown RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 ZNF426Q9BUY5 554 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms